Scomber scombrus (Atlantic mackerel): 133992894
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Entry
133992894 CDS
T10651
Symbol
plcd4b
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00562
Inositol phosphate metabolism
ssco01100
Metabolic pathways
ssco04020
Calcium signaling pathway
ssco04070
Phosphatidylinositol signaling system
Module
ssco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
133992894 (plcd4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133992894 (plcd4b)
04070 Phosphatidylinositol signaling system
133992894 (plcd4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133992894 (plcd4b)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
133992894 (plcd4b)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
133992894 (plcd4b)
Endocytosis
Macropinocytosis
Phospholipase C
133992894 (plcd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
C2
EF-hand_10
PH
EF-hand_7
GDPD
EF-hand_6
PH_12
EF-hand_1
EF-hand_5
DUF4028
Motif
Other DBs
NCBI-GeneID:
133992894
NCBI-ProteinID:
XP_062287660
LinkDB
All DBs
Position
13:complement(25566082..25585876)
Genome browser
AA seq
754 aa
AA seq
DB search
MDPEGSRIQDDPDVKVLLAGSTLRKVKSRLWKKNRHFRLLADSQTIWHKSRRAGRGHSTF
SVTEVEAVREGHQSEVLQSIAEDFPADLCFTLVFHGRQGNLDLVAESPEEARAWIQGVRK
LIHRVKTMDAKEKLDQWVRDWFQKADKNKDGKMIFKEVKKLLKMMNVEMNEEHAWHLFTM
ADKSESDSLEMEEFVLFYKMLTQRDEVWKVFQDYSADGEKLMLDELDSFLKIEQHEEERS
AQYPQQLIDRYEPSETAKTQGAMSLDGFQMYLCSQEGSIFKPEHVDLHQDMSQPLSHYFI
SSSHNTYLMEDQLRGQSSLEAYIQALKRGCRCVEVDCWDGSDGEPVVYHGHTLTSKILFK
DVISTLKEYAFKASDFPLILSLENHCCVEQQTVMAQHLSQILGDTLLTTLLDGQVPQQLP
SPQELKGKILLKAKKIGGLECSLDETDLVSDDDEMANGDAESPSAEDLPAECLNQNEKKS
KSKLSRELSDLVVYCKSVHFHGFEHARLHAKCYEMSSFSESKAKRLVKETGTDFVQCNTK
QLSRIYPSGLRTDSSNYNPQEMWNVGCQIVALNFQTAGQEMDLNDGLFRQNGCCGYVLKP
DFMRDGNTQFSPEKQGERQNYKPLHLSFQVISGQQLPKVNQKEGSIVDPLVRVEIYGVPQ
DQAKDETTHINNNGFNPVWNETLNFVVHTPELALVRFVVEDYDKASRNDFIGQFTLPFTC
IQTGYRHIHLLSKDGTAIPPASLFIHISISEVTI
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgaaggttcacgtatccaagatgacccagatgtcaaggtgctgttggcgggg
tcgactctgaggaaggtgaagtcccgtttgtggaagaagaatcggcatttccgacttctg
gcagatagccagaccatctggcacaagtccagacgggcggggagaggccattccactttc
tcggtcactgaggtggaggcggtgcgtgagggccaccagtctgaggtcttgcagagcatc
gccgaggatttccccgctgacctgtgcttcaccttggtgtttcatggtcgccaaggcaac
ctggacctggtggccgagtcccccgaggaggcacgggcgtggatccagggagtgcgcaag
ctgattcacagggttaagacgatggatgcgaaggagaagcttgaccaatgggtcagggac
tggtttcagaaggccgacaaaaacaaagacgggaagatgattttcaaagaggtgaagaag
ctgctgaagatgatgaatgtagagatgaatgaggaacacgcttggcatcttttcacgatg
gctgacaagtcagagagcgactctttggaaatggaggagtttgtcctcttctataagatg
ctgactcagcgggatgaagtgtggaaggtgtttcaggattactcagcagatggagagaag
ttaatgttggatgagctggacagcttcctgaagatcgagcaacatgaggaagagcgcagc
gcacagtacccccagcagctgatcgaccgctatgaaccatctgaaacagccaaaacacaa
ggcgccatgtctttagatggcttccagatgtacctgtgctcccaggagggctccatattt
aaacctgaacatgtggatcttcaccaggacatgagccagccgctcagccactacttcatc
tcctcctcacacaacacctacctcatggaggaccagctccgagggcagagcagcctggag
gcgtacatccaggccttgaagagaggctgccgttgtgtagaggtggactgctgggacggc
agtgatggggagcccgtcgtgtatcacggtcacactctgacctcaaagatcctcttcaaa
gatgtcatctcaacgctcaaagaatatgccttcaaggcatctgacttcccgctcatcctg
tccctggagaatcactgttgtgtggagcagcagaccgtaatggcccagcaccttagccaa
atactgggtgacacgctgctgaccactctgctggatgggcaagtccctcaacagctccct
tctccacaggaactgaaagggaagattttacttaaagccaagaagatcggcggtctagag
tgttctctcgatgaaacagatttagttagtgatgacgatgagatggccaacggtgacgct
gagagcccgtctgcagaagacttacctgctgaatgtttaaaccaaaatgagaagaaatcc
aagtccaaactctcccgggagctgtcagacctggtggtttactgcaagagcgtgcacttc
catggctttgagcatgctcgtttgcacgccaagtgctatgaaatgtcttcattctctgag
tccaaggccaagaggcttgttaaagagacagggacagattttgtgcagtgcaacacgaag
cagctgagtaggatttatcccagtggcctcaggaccgactcctccaactataacccccag
gagatgtggaacgtgggctgccagatagtggctctgaacttccagacggctggtcaggaa
atggatctgaacgatgggctcttcaggcagaacggctgctgcggctacgtccttaaacct
gacttcatgagagacggcaacacacagttcagtccggagaagcaaggggagcggcaaaac
tacaaaccactccacttatccttccaggtgataagtgggcagcagctaccaaaggtaaac
cagaaagagggctctatcgtagaccctctggtcagagtggagatctacggagtaccacag
gaccaggccaaagacgagaccactcacattaacaacaatggttttaaccccgtgtggaat
gaaactctaaattttgtcgtccacacacctgagctggccctggttcgctttgtggtggag
gactacgacaaggcgtccagaaatgacttcattggacagttcactctcccgtttacgtgc
atccaaacaggatatcgtcacatacatctgctctctaaagatggaacagcaatccctccc
gcttcactcttcatccatatcagcatctcagaggttacaatatga
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