Scomber scombrus (Atlantic mackerel): 133992897
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Entry
133992897 CDS
T10651
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
ssco03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133992897 (upf3a)
mRNA cycle factors
P-body specific factors
133992897 (upf3a)
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GFIT
Other DBs
NCBI-GeneID:
133992897
NCBI-ProteinID:
XP_062287664
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Position
13:complement(8589009..8595429)
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AA seq
468 aa
AA seq
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MRSEKDQMTVGKEKNVVEIKFRDLPREQDNTGCNSKQKEEKKEVFTKVVIRRLPPNLSKD
LLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKISKKKLKKKDAKVGSIEEDPEYKRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSDKDIKIKLLKKSDRDDDVDSDRIKDKSEVGETDRGKWEKPGGQMKSK
DPKENRGQPESDKEQREQHCRRQRDKDHRGKDDERKRQRHHYEFDKFMRRKDETKWGKGY
CQDRAKKEGHHHGYSYCPDSGDKLGKEDREDLGNRKERLRNKVSEKDRPAMQLYQPGARN
RKRMSSAGKGYDCIPVGHSPEPGTERCFDVVTMATGLDKGFEKSKDEQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaccaaatgacggtgggcaaggagaaaaacgtcgtcgagataaag
tttagggacctcccaagagagcaagacaacactggctgtaactccaagcagaaagaagag
aaaaaagaggtttttacaaaggtggtgattcgaagactcccacctaacctatcaaaggac
ctgttagaagagcagctcagtccacttccttcctatgactattttgagttctttccagcc
gatcaaagtctttacccccacctgttctccagagcatatatcaattttaaaaaccctgaa
gatatccttttgtttcgggaccgatttgatggctatgtcttcattgacaacaagggtcag
gagtaccctgcagtggtagagtttgccccgttccagaaaatctccaagaagaagctaaaa
aagaaagatgccaaagttgggagcattgaagaagacccagaatataagcggttcttggag
aactactcctgtgatgaagaaaagtctatggccaaccctgagactctgttgggagaaata
gaggcaaaaaccagagagctcatagcgaaacggaccacaccgctgttggagtacatcaaa
aataagaaaattgagaaacagagaataagggaggagaaaagagaggagaggagaagaaga
gagcttgaaaagaaacggcaacgagaggaggagaagagaaagcgacgggaggaggagaga
cgcaaacggaaggaggcagagaagcagaagaaattgtctgataaagacatcaaaattaag
ctcctaaagaagagtgacagggacgatgatgtggattcagaccgaataaaggacaaaagt
gaagttggggagacagacagagggaaatgggagaaacctggtggacaaatgaagtcaaag
gaccccaaggaaaatagaggtcagcctgagagtgacaaggaacagagagaacagcactgc
cgcagacagagagataaagaccaccgagggaaggacgacgagaggaaacgtcagcggcac
cactatgagtttgacaagtttatgcgccgcaaagatgaaacaaaatggggaaagggttac
tgccaggatcgagccaagaaagaggggcaccatcacggttattcttactgccctgacagt
ggagacaaactgggaaaagaggacagggaggacctgggtaacaggaaggaacgcctccga
aacaaggtgagcgagaaggaccgtccagccatgcagctctaccagcctggcgcacgcaac
cgcaagcgcatgagctcagcaggcaaaggctatgactgcatccctgtgggtcactcacct
gaacccgggactgaacgttgctttgacgttgtcactatggcaacggggctggataagggg
ttcgagaaaagcaaagatgagcagtga
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