Scomber scombrus (Atlantic mackerel): 133992907
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Entry
133992907 CDS
T10651
Name
(RefSeq) indian hedgehog B protein-like
KO
K11989
indian hedgehog
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133992907
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133992907
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C46: hedgehog family
133992907
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GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF6212
Motif
Other DBs
NCBI-GeneID:
133992907
NCBI-ProteinID:
XP_062287687
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Position
13:17149797..17157080
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AA seq
434 aa
AA seq
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MRISFLLLTASLCALVLLLAPASEGCGPGRGYGKRRPPKKLIPLAYKQFSPNVAEKTLGA
SGRPEGKITRNSERFKELTPNYNTDIIFKDEEDTGADRLMTQRCKDKLNSLAISVMNMWP
GVKLRVTEGWDEDGHHSEDSLHYEGRAVDITTSDRDRNKYAMLARLAVEAGFDWVYYESK
AHIHCSVKSEHSVAAKTGGCFPGDAQVILEGGATKQMRDLLPGERVLASTTTDGHGPLLY
SPVLSFLDRQPNITKIYYVIGTNAGLNIMLTAAHLIFVADCTGELSEPGWEETAGGPFLG
SIRGAKPSREAGLRTIFASEVQPRQCVVTSQGKGATLSAVTFVEELKITGLYAPLTQHGS
IVVNGVLASCYAAVDNHHLAHWVLAPLRFFYSFMGPSEPQTDGLHWYPWLLQRLGKMLLD
AGHFHPLGIEQGHR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctccttccttcttctcaccgcctctctgtgtgccttggtcctcctcctcgca
cctgcctcggagggctgcgggccggggagggggtacggcaagagacggcctccaaagaag
ctcatcccgctagcctacaagcagttcagccccaacgtagccgagaagaccttgggagcc
agcggacggcccgagggcaaaataacgcgcaactccgagcgctttaaagaactgacgccg
aattacaacacagatattatcttcaaagatgaggaggacacgggcgccgacaggctcatg
acccagcgttgtaaagacaagttaaactctctggccatctctgtgatgaacatgtggccg
ggcgtgaagctcagagtgacagagggctgggatgaggacggccatcattcagaggactca
ctgcactatgagggacgtgctgttgacatcaccacctcagacagggacagaaacaaatat
gccatgttggcccgactggccgtagaagctggatttgactgggtctactatgagtccaag
gcccacattcactgtagtgtcaagtcagaacattctgtggcagccaaaactggtggttgt
ttccctggcgacgctcaggtcatcctggagggtggagctactaaacagatgcgtgacctt
ctccctggtgaacgtgttttggcttctacaacaacagatggccatggcccgcttctctat
agcccagtattatcctttttggatcgccagcccaacatcacaaagatctactacgtcatt
ggcaccaacgcaggacttaatattatgctcacagcggcacacctgatctttgttgcagac
tgtactggggaactgagtgagccaggatgggaagagacagctggggggccatttctgggc
tccatacgtggagccaagcctagccgggaggcaggtctgaggacaatttttgccagtgag
gtccagcccagacagtgcgtggtaacatcacaagggaaaggggcaacactttcagctgtg
acctttgtagaggagctgaaaatcactgggttatatgccccactaacccagcacgggtct
atagtggtgaacggcgtactggcatcatgctatgctgctgtggacaatcaccatttggct
cactgggttctggccccgctgcgattcttctacagcttcatgggaccgtcagaaccacag
actgatggactgcactggtacccttggcttctgcagaggctggggaaaatgctgctggat
gctggacacttccaccccttggggatcgagcaaggacatagatag
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