Scomber scombrus (Atlantic mackerel): 133992914
Help
Entry
133992914 CDS
T10651
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133992914 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133992914 (u2af1)
Spliceosome [BR:
ssco03041
]
Complex A
U2 snRNP components
U2 related factors
133992914 (u2af1)
Complex B
133992914 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
133992914
NCBI-ProteinID:
XP_062287694
LinkDB
All DBs
Position
13:11426219..11433097
Genome browser
AA seq
235 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRQGRGGGGGRDHERRRSRDRERSGRF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcgtccatttttgggacagaaaaagataaagtgaactgctctttt
tatttcaaaattggtgcctgccgacatggagaccgctgctccagattacacaataagccg
acattcagccagacaattgccctcctgaacatttaccgcaaccctcaaaacagtgcccag
tctgccgacggtctaacatgtgccatcagtgacatggagatgcaagagcactatgacgag
ttttttgaggaggtcttcacagagatggaagaaaagtatggagaggtggaggaaatgaac
gtgtgtgacaacctcggggaccacctagtgggaaatgtgtatgtgaagttccgttatgaa
gaggatgctgagaaggccgtgatagacctgaataatcggtggtttaatgggcagcccatc
catgctgaactgtctcctgtcacagacttcagagaagcctgctgtcgccagtatgaaatg
ggggaatgtactcgtggtggcttctgtaacttcatgcatctgaagcccatctcacgtgaa
ctgaggagagagctctatgggcgccggaggaagggccgtcataggtctcggtcacgatcg
agagagagacgatcacgttcaagggacagacaaggtcgaggagggggagggggccgtgac
cacgagagacgtcgctccagagacagagagcgttcaggacgattctga
DBGET
integrated database retrieval system
