Scomber scombrus (Atlantic mackerel): 133992915
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Entry
133992915 CDS
T10651
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133992915 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
133992915 (gtf2e1)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
133992915 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
133992915 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF1272
Motif
Other DBs
NCBI-GeneID:
133992915
NCBI-ProteinID:
XP_062287695
LinkDB
All DBs
Position
13:20682928..20695740
Genome browser
AA seq
444 aa
AA seq
DB search
MIEPQLLTEVPATLKRLAKQVVRGFYGVDHALALDVLIRNPCVREEDMLELLKFDRKQLR
SILNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESVCPDARTPVARFNE
QIEPIYALLRETDDVNLSPELLEPEPCEIPALKQSRERSAAAGNAAGPHREAWSNKGSSY
ADLYTQNVVISMEEQEEQQKQANEGKAPKERPVWLTQSTVQGAYSEPDALKNRGEVVPGA
QDGAASLGMGQADENEEVMRALLIHEKRGAAAAGGGGASAAAKGLTSAKANASDSDSDTS
ESDDETPAVPPAATAAKYRGAEEEEDDDEDFEEVGDEPMVMVGGRSFSYREVSQRPELVE
QMSAQEKEAYIEMGRNLFQDMYLY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccacagctactgaccgaggtccctgcaacacttaagcggctggccaagcag
gtcgtaaggggtttctatggggtggatcacgccttggccctggatgtgctgatccgcaac
ccatgtgtacgcgaggaggacatgctggagctgctcaagtttgaccgtaaacagctacgc
tccatactcaacacactgaaagctgacaagtttgtcaagtgccgcatgagggtggagacg
gctcccgatggcaagacaacacgacacaactactatttcatcaattacaggttactggta
aatgtggtcaagtataaattggatcacatgcgacgacgcattgagacggatgagcgagac
tccaccaaccgtgcctccttccggtgcccctgctgtttctccaccttcacagacctagaa
gccaaccagctgtttgacccgatgacaggtacatttcgctgcaccttctgccaaaccgag
gtagaagaagatgagtctgtctgtcctgatgccagaacaccagtggcacgcttcaatgag
cagattgaacccatctacgctctgctacgcgagaccgacgatgtcaacctgtcccctgaa
ctgctggagccagagccttgtgaaatccctgctctcaaacagagccgtgaacgctcagca
gcagcaggaaacgctgcaggcccacaccgcgaagcctggtctaacaaaggctcgtcctac
gccgacctgtacacccagaatgtggtcatcagtatggaggagcaggaagagcagcagaaa
caggccaatgaaggcaaggcacccaaagagagacccgtctggttgacccagagcaccgtg
cagggggcttacagcgagcccgatgctctcaagaaccgtggagaggttgttcccggagcc
caggatggagcagctagtcttggaatgggccaggcagatgaaaatgaggaggtgatgcgt
gccctactcatccatgagaagaggggagcggcagcagcaggtggaggcggagccagcgct
gcggccaaggggctaacatccgccaaggctaatgccagcgactcagacagcgacaccagc
gaatcagatgacgagactcccgcagttcctcctgctgccacagctgctaagtatcggggt
gcggaggaagaggaggatgatgatgaagactttgaggaggtgggagatgaaccgatggtg
atggtgggaggccggtcgttctcatacagagaagtgagccagaggccagagctggtggag
cagatgtctgcacaggagaaggaggcctacatcgaaatgggacgaaacctcttccaggat
atgtacttgtactga
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integrated database retrieval system
