Scomber scombrus (Atlantic mackerel): 133992923
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Entry
133992923 CDS
T10651
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133992923 (smarce1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133992923 (smarce1)
PBAF complex
133992923 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
CENPH
Motif
Other DBs
NCBI-GeneID:
133992923
NCBI-ProteinID:
XP_062287707
LinkDB
All DBs
Position
2:complement(5035148..5046383)
Genome browser
AA seq
427 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPNTTGFVGYNPYSHLAYNNYRLGGSQSSNSRATNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFTNELKRLCCMKVEVDMEKISAEISAAEEAARKRM
AEREKDAGDRGAREAPTCVLAEEEKHVCATHGNKSQQNSLSECSNKEGEDTESNPTDTPG
KQKASEELEAHPGSEEGASEDKESVPEGAMEEGTSDSNTGSETTSAQTEDAPTSEPSEGP
SRARPAH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaggccatcctatgcccctccccctccccctgcccctacaactcaaatgccc
aacactaccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcgggcaacgaattcctcaggaataaatatccca
aagccacccaagccacccgataagccattgatgccatacatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgagagcatgaaggcctatcacaactcgccagcctacctg
gcctacgtcaatgcaaaaagccgcgccgaggcagctctggaagaggagagccgccagagg
cagtccagactcgacaagggtgagccttacatgagtattcagccagcggaggatccagat
gattacgacgatggcttttccataaagcactcggccgcggcccgtttccagcgaaaccac
cgtttgatcagcgagatcctcagcgagagcgtagtcccagatgtgcggtcggttgtcacc
accgctcgcatgcaggtcctcaaacgccaggtccagtctttgatggtgcaccagagaaag
ttggaggcagagttgcttcagattgaagaccgccaccaggacaagaagagaaaattcatt
gaagccacggagtcgttcaccaatgagctcaaaaggctgtgttgtatgaaagtggaagtg
gacatggagaagatttctgcagagatttctgcagccgaagaggcagcccgcaaacgcatg
gcagaacgcgagaaggatgcaggagaccgaggagccagagaggcccccacctgcgtgtta
gcagaagaagagaaacacgtctgcgcaacacatggcaacaagtcccagcaaaattccctc
agcgaatgtagcaacaaggaaggcgaggacacggagtccaatccaacagatacaccaggg
aagcagaaggcctcagaggaactcgaagctcatccaggcagcgaggagggggcatccgag
gacaaggagagcgtcccagagggagccatggaggagggaaccagcgacagtaacacgggc
tcagagaccacctccgctcagacagaagatgccccgactagtgagccatcagaggggccc
agcagggcgagaccagcccactga
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