Scomber scombrus (Atlantic mackerel): 133992981
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Entry
133992981 CDS
T10651
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133992981 (trappc10)
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133992981 (trappc10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_14
TPR_12
SNAP
TPR_1
TPR_7
Gryzun-like
TPR_19
TPR_8
Motif
Other DBs
NCBI-GeneID:
133992981
NCBI-ProteinID:
XP_062287774
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Position
13:4806634..4833739
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AA seq
1265 aa
AA seq
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MECQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEAYKSSVKEDMLRWQNSLRTHSSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRSWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDQAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRLRSARLV
GKSLAEFYMRKGDPEKAETFLQEALKSYVSEGWSLPVTHTRKQIAECQKVLGRTVDYLQT
SALLAGDVNLTTEERKHFCQEILTYAGKSGDQSKQLSLSMGVFSQLTRLQFRPATASVHS
GAVLQVELTLRCLMPVSVHIQQVAASIHFDLEHAGIHGRSKGAQRQTNPGTVDFNQVSSS
AGPPSSSSAGGPSLEMDEIHDRSPSDNSLNSAGVVCKNTHLVMRRHDSNSPPDTPNCVSP
PAVTMKEGAQMLKVQDVTLEPGNNSIVFTAPSGQPGTYTLRQLCATVGQVQFVLPHIYPS
VQYEVYSQEPQLTVEPLSEPLLAGLPQKVKFTLLTGHYTVKKGDALQLSNTDTMPILPSN
SCTASISNPAAEVVGESVLSIQSSEKVTSISLPPTPPYHTLEFQLEVLCIIPSGFDRPPN
ERLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAG
NRKYIQVCVQNVSDVNFTLAEVKLTEKQHASLELQSLNTKTKQLLCSKHSVFCLWEVRWK
DDLPLCLQCVFSANFSPLNQDVSSFKPFHYQFQLERVTTLYSVRAEILPPVGEQHCRSGL
LCGLEVCITRLSEPAEGEMTEESKTDTDGLKTTKLMYEVADSSSNWAVCGKSSGMVSMPI
SANATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKTLD
DQGDTASIRSRGSVHSVGSGEQQQKGVAMPRLEPFSPGQVFNHSQTRQVLVLPATDDHIM
EVNAT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaagccgatcatctatactatggaaaacaagccgattgtaaca
tgtgctggagaccagggcttgtttacgtctctctatacctcattggcccaacagcttccc
cgggagccaatggagtggaggaggacatacggccgcgcaccaaaaatgatccaccttgag
gctaattttgttcagtttaaagaggagctgctccccaaggagggcaacaaggccctgctc
accttccccttcctccacatctactggactgactgctgtgacacagaggcatataagagc
tcggtgaaggaggatatgctgcgctggcagaacagcttgcggactcacagctcagcagac
tgggtcatcatcgtcgtggagaccaacgacacgaagaagaagaacaagaccaacatcctg
cctcgctcgtccatcgtggacaagatccgcagcgacttctgcaacaagcagaacgacagg
tgcgtggtgctgtcggatcctctgaaggactcctcccgctctcaggaatcctggaattcc
ttgctgctgaagctgcggaccctcctcctcatgtccttcaccaagaacctgggccgcttc
gaagacgacatgcgcacgctccgagagaaacgcacacagcctggctggagcttctgtgaa
tacttcatggtccaggaggagcttgcctttgtgtttgaaatgctgcagcagtttgaggac
gcccttgtccagtatgatgaactagacgctctttttacccagtacgtccttaactttgga
gctggagatacagccaactggcttggctcgttttgcgctccggtgcgcagctggagcggc
ttactgctgcggcggcccatcgacatggagaagagggacgggatccagagaggggaagcc
agcctactagacctgaggagctacctgttctcccgccagtgcaccttactcatcttcctc
cagaggccctgggaggtgactcagagagccctggagctgctgcacaactgcgtccaggag
ctacgcctgctggaggtgtcggtgctggagggggcgctggactgctgggtgttcctaagc
tgcttggaggttctgcacaggatcgagggctgctgcgatcaggcccagctggctgcaaac
tgctcccacactgtcggtctgtgggcctacgctactgacaagttgaagtctctgggtgaa
ctgtgtggcctggtgtcagagaagggccccacgtctgaggacctgaacaggactgtggat
ctgctggctggactgggagatgagaggcctgagactgtcaacagtctgcagagcccttac
aagaagctaaaagaagcgttgtcatcagtggaagcttttgaaaggcactatctcgaacta
tctcatgctgctatggagatgtacagggccatcggtcgactgaggtccgccagactggtg
ggaaaaagcctggctgagttctacatgaggaagggggaccctgagaaggcggagaccttc
ttacaggaagctctgaagtcttatgtatcagagggctggagcctccctgtcactcacacc
aggaaacagatcgctgagtgtcagaaagtgctgggcagaactgtagactacctgcagacc
agtgccttgttggcaggtgatgtgaatctgaccacagaggagaggaagcacttttgtcag
gaaattctgacctatgccggcaagtctggagatcagtctaaacaactatctctcagcatg
ggcgtcttctctcagctcacgcggctacagttccgtccagccacagcctccgtgcattcc
ggagccgtcctgcaggtggagctcaccctgcgatgtttgatgcccgtttcggtgcacata
cagcaagtcgccgccagcattcacttcgacctggagcacgcggggattcacggaagatct
aagggagctcagagacaaacaaacccagggacagtagactttaaccaggttagctcgtca
gcggggcctccctcctcctcctcggccgggggcccttctttagagatggacgagattcac
gacaggagtccctcggacaattctctcaactcggcgggggtggtgtgtaagaacactcac
ctggtcatgcgtcgtcatgacagcaactcaccgccggacacgcccaactgcgtcagccct
cctgctgttaccatgaaggaaggagcacagatgctgaaagttcaggatgtaacgttagag
cctggaaataacagcatcgtatttacagcaccaagtggacagccaggtacttacacgctg
cgtcagctgtgtgccacagtaggtcaggtgcagttcgtgcttcctcacatctacccatcg
gtccagtatgaagtatattctcaggagccccagctgactgtggagcctctctcagagccg
ctgctggccggtctgcctcagaaggtgaagttcactctgttgacgggtcactacaccgtg
aagaaaggagacgctctgcagctcagcaacacagacaccatgcccatcctgccatccaac
agctgcaccgcctccatcagcaaccctgctgctgaggtggtgggcgaaagcgtcctctcc
atccaatcgtccgagaaggtgaccagcatcagcttgccccccacccctccctaccacacc
ctggagttccagctggaggtcctgtgcatcatcccgtccgggttcgaccggccccccaac
gagaggctgaccaacggagaggtccgacaccggccacgcagctacagtcacccagacacg
cccatgaccgccatcgaccaaaggatgtctatcgactgtccgtggtcgatctactccacg
ctgctcgccctcaccttctacatccccttcaagaccaaacactcactgctttctgctggt
aacaggaagtacatccaggtgtgtgtgcagaacgtgtcagacgtgaacttcacgctggca
gaagtgaagctgacagagaagcagcacgcctcgctggagctgcagtccctcaacactaaa
actaaacagcttttatgcagtaagcacagcgtgttctgcttgtgggaggtgaggtggaag
gacgacctgcccctttgcctccaatgcgttttctccgccaacttctctccgctcaaccaa
gacgtctcctccttcaaacccttccactaccagttccagctggagagagtcacaacgttg
tacagcgtgagagctgagatcctgcctcctgtcggcgagcagcactgtcgctcagggttg
ctctgcgggctggaggtgtgtatcacacgactgagcgagcctgcagagggagagatgaca
gaggagagcaagaccgacactgacggcctcaaaaccaccaaactcatgtatgaagtggct
gacagcagcagtaactgggcggtgtgtgggaagagttcggggatggtgtccatgcccatc
tctgccaacgcaacccacaaggtgcagatcgaggtgatgcctctgttcgccggacatctg
cctttccctaagatcaaagtgctcaaatacctgccacacactgcagcagtggccatccag
ccagaccctgacagctgtgtggagaacgacagcctgtccctgctggacaagacgctggac
gaccagggggacacggcgagcatccgcagccggggcagcgttcactcagtgggcagcggc
gagcagcagcagaagggcgtggccatgccgcgcctggagcccttcagcccaggacaggta
ttcaaccacagccagacacggcaggtcctggtgctacctgccaccgacgaccacatcatg
gaagtcaacgctacatga
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