Scomber scombrus (Atlantic mackerel): 133993013
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Entry
133993013 CDS
T10651
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04148
Efferocytosis
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133993013 (itgb5)
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin beta subunits
133993013 (itgb5)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133993013
NCBI-ProteinID:
XP_062287821
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Position
13:complement(6700308..6742548)
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AA seq
803 aa
AA seq
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MWSPGTWMWRAAVCCMLLETFLHTARGLNICMSGSATSCEECLLIHPSCAWCAQEDFVRG
RTLTSRCDFSQNLRKRGCEVRFIEYPTSSISVLNNRPLSSKGSGSAQYDVVQIMPQKISV
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQENPCSGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKDEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGLCHLNDKNEYSASTRMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIINAYNNIRSKVELTVLDHPEDISLSFTATCQDGQPLPGLKKCADL
KIGDTVSFNVSVEARSCPPRGTDQSFTIKPVGFKDRLEVVVDYQCDCGCSRTAQTNSSIC
SSIGTYNCGTCHCEPGYLGARCECQEGEASSLYMSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETASCIA
DDGQMCSGRGNCMCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ
TCQRLCKDEIITVETLNTEDPGAVLCLYKTDNDCVMKFTYSEHASGQSVLTALKEAECGG
GPDAMMVLLAVVGSILLVGVLLLAVWKLVITIHDRREFTRFQNARSRARYEMASNPLYKQ
PTSTHFVETDFNMYGKSYNGGVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgtggatgtggcgagcggctgtgtgctgcatgcttctggaaaca
tttctgcacactgccagaggtctcaacatatgtatgagtggcagcgctacatcctgtgaa
gaatgcctcctaattcaccccagttgcgcctggtgcgcacaagaggatttcgtgaggggg
cggactctaacatcacgctgcgattttagtcaaaacttgcgcaagaggggctgcgaggtg
cggttcatcgaataccccaccagcagcatctccgtcctgaataataggcctctcagttct
aaaggatcggggtcggcccagtacgatgtcgtccagattatgcctcagaagatctctgtc
agcctgcgaccaggagaccagacgtggtttgggctgcaggtgcggcaggtggaggactac
ccggtggatctctactacctgatggacctttccctttccatgaaagatgatctggacact
atccgtaacctgggcaccaaactggccctggagatgggcaagctcaccagcaacttcagg
ctgggcttcggttcctttgtggacaaaaacatgtcccccttctcctacacagcacccaaa
tatcaggagaatccatgcagtggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcctctcactgacggataaagtggaccgtttcaacgaggaggtgcagaaa
cagatggtctctcgcaaccgggacgcgccagagggcggatttgacgccatcctgcaggct
gctgtttgtaaggatgagataggctggaggaaggaagcctaccacttgctggtgtttgcc
acagacgacgtgcctcaccttgctctggacggcaggctcggaggcctcgtccagcctcac
gatggactctgccaccttaatgacaagaacgagtacagcgcctcaactaggatggattat
ccctctctggcgcttctcggggagaaactggcagaaaataacatatttctcatctttgcg
gtgacgaaacggttgtacgttatttataagaattttaccgcactcatacctggaactaca
gtagaaatcctggaccaggactctaagaatgtcattcagctgatcatcaatgcctacaat
aacatccgctctaaagtggagctgacagtgttggaccacccagaggacatcagtctttcc
ttcaccgccacctgccaggatggacagccgctgccaggtctcaagaagtgtgccgaccta
aagataggagacactgtatcgttcaacgtgagtgtggaggcgaggagttgccctcctcgt
ggcactgaccagagcttcaccatcaaacctgtgggattcaaagaccgtctggaggtggtg
gtggattaccagtgtgactgcggctgcagtcggacagcacagaccaacagcagcatctgc
agctccattggtacatataattgtgggacttgtcactgcgagccaggctacctgggcgct
cgctgcgagtgccaggagggcgaggccagcagcttgtacatgagcgcctgccgggaagcc
gaggggaagcagatctgcagcggccgcggagagtgtagctgcaaccagtgtctgtgctac
gagtcggagtttggcaagatctacggcagcttttgcgagtgcgacgacttctcctgcgcc
cgacacaaaggcatcctctgctcaggtcatggggaatgtcactgcggggagtgcaagtgc
cacgctggatacattggcgacaactgtaactgctccaccgagacggcgtcctgcattgcg
gacgatgggcagatgtgcagcgggcgaggcaactgcatgtgcggacgctgccagtgtaca
gagccgggggcctttggagacacctgtgaaaaatgccccacctgccctgatgcctgtggt
actaaaagagaatgtatcgagtgtcggcttttcaactcagggcggctcgcagacaaccag
acttgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaatactgaggac
cccggtgctgtgctttgtctgtataagacagacaacgattgtgtgatgaagttcacatat
tctgagcacgccagcggacaatccgtcctcacagcccttaaagaggcagagtgtggtggc
gggccagatgccatgatggtgttgctggctgtggtgggcagcatcctgctggtaggagtg
ctgctgctggctgtctggaagctggtcatcaccattcatgaccggagagagtttacacgc
ttccagaacgcacgctcacgtgcccgatacgagatggcctccaaccctctgtacaagcag
cccacctctacacatttcgtagaaacggatttcaacatgtacgggaagtcctacaacggg
ggggtccactga
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