Scomber scombrus (Atlantic mackerel): 133993033
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Entry
133993033 CDS
T10651
Symbol
marco
Name
(RefSeq) macrophage receptor MARCO
KO
K13884
macrophage receptor with collagenous structure
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133993033 (marco)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133993033 (marco)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Scavenger receptors
133993033 (marco)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Collagen
SRCR_2
Motif
Other DBs
NCBI-GeneID:
133993033
NCBI-ProteinID:
XP_062287855
LinkDB
All DBs
Position
13:complement(29133530..29149924)
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AA seq
406 aa
AA seq
DB search
MATSVDAANDRVSYTQTNPLFDMSLSRSDLYNLHPDTLKPARPRRQWCFNIIVVYLILQT
PLNAFLLYKVFTMDSMSSPRLDKQVSNRIPEEPSERDLQTLVLNNTKETKTLRGNLWSLQ
TQVNSLCGADGQLDRMKSELNLLNTSTKSLGDKLSDISLKPGPPGPPGLPGDNGNPGEKG
LKGDMGIVGPQGPKGDTGLNGQTGPSGNQGPTGPTGPSGPRGFTGPKGDPGNQGPGAKGE
KGSPGIPGDKGGQGTAGVPGPVGRSGLKGDKGSSGAAGAPGLPGAKGSTGSRGPTGLQGA
KGEKGSIGATVRLAPGPSRGRVEVNYKGSWGTVCDDNFDSVDGKVVCKMLGYQRASNVYA
AVAGTGTILLDELRCVGTEMSIFDCPHAGIGVNNCNHNEDIGVVCV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcagtggacgcagccaacgatcgagtgtcgtacactcagaccaacccgctg
tttgacatgtcgctcagcaggagtgatctctacaacctccacccagacactctgaagccg
gcgaggcccagacggcagtggtgctttaacattattgttgtttacctcatcttgcagacg
cctcttaatgccttcctcctttataaagttttcacaatggactcgatgtccagccccagg
ttagataagcaggtgtccaatcgcattcctgaggagccgagcgaacgtgacctgcagacc
ctcgtcctcaacaacaccaaagaaaccaagacgctgaggggaaacctgtggagcctgcag
acccaggtgaacagtctgtgtggagcggacggtcagctggacaggatgaagtctgaacta
aacctgctcaacacaagcacaaaaagtctgggagacaaactgtcggacatcagcctcaaa
ccaggaccaccaggacctccaggactgcctggagataatggaaatcctggagagaaaggc
cttaaaggtgacatgggcatcgttggacctcaaggaccaaaaggtgacacgggactcaac
ggacaaactggaccgtcgggaaatcaaggcccaaccggacctactggaccgtcaggaccc
agggggtttactggacctaaaggagatccggggaatcaaggaccaggagcaaaaggagag
aaaggatctcctggaataccaggagataaaggtggacaggggaccgctggtgtaccaggc
cctgttgggcgttcggggctgaaaggagacaaaggcagcagtggagctgcaggtgcacca
ggtcttccaggtgcaaaaggatcaactggctctagaggccccaccggactacagggagcc
aaaggagaaaaaggaagcattggtgctacagttcgtctggccccgggtccgagccgagga
agggtggaggtgaattataagggatcgtggggaaccgtgtgtgacgacaacttcgacagt
gtggatgggaaggtggtctgcaagatgctcggctaccagagagcctctaacgtctacgct
gccgttgcagggaccggtacgatcttgctggacgagctgcgctgcgttggaacagagatg
agcatcttcgactgtccgcacgctggcatcggtgtgaacaactgcaaccacaacgaggac
atcggagtggtgtgtgtctag
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