Scomber scombrus (Atlantic mackerel): 133993106
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Entry
133993106 CDS
T10651
Name
(RefSeq) CASP8 and FADD-like apoptosis regulator
KO
K04724
CASP8 and FADD-like apoptosis regulator
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
ssco04210
Apoptosis
ssco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133993106
09143 Cell growth and death
04210 Apoptosis
133993106
04217 Necroptosis
133993106
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133993106
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C14: caspase family
133993106
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Gene cluster
GFIT
Motif
Pfam:
DED
Peptidase_C14
PYRIN
IcmW
Motif
Other DBs
NCBI-GeneID:
133993106
NCBI-ProteinID:
XP_062287950
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Position
13:16809575..16814663
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AA seq
472 aa
AA seq
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MALPDTHLLQYINIIADSLSCGEVGRLLYLCENLDADDSVSRLKDVLRSKVTGCEDGRLL
LAELLLHLRRFDILRKVFSYSRAEVEETLKHREVLPRFRVLIANISEDMASEDLKSVKFL
LGSTLPREKTEKAKNFLDVVTELEKLDKVSPERVELVEECLRHIDRIDLAKKVNMYKTSV
VTSEQRSCQQQSYSFPLQSPTPNSTQSPQQTRLVQSRHIVQEKIPVPIYREKNYRSPLDW
YKFNSDPRGVCVIIDCVGNDGEMLEHTFKALHFNVVLHKLLSVDDTLSTLRRIFRQRENH
RGDGFVCCIISRGTASHLLATDSYGMGLRLDTVRQLFTADECPMLAGKPKLFFIQRYSIP
EFQPYARMQHRDKDLETDGCDGLSRGNSVPTDADVFWSHCWTDERHLQQGHHRSIYLKAL
TDALHKGQRRKTSLIDAHLEVNRAIYEHNNGNPGEDYHIDLKHTLRKELHLQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccagacacacatctgctccagtatattaatataatagcagattccctcagc
tgcggtgaagtcggaaggctcctgtacttgtgtgaaaacctggacgcagatgacagcgtg
tctcgtttgaaggacgtcttgaggtctaaagtgacaggctgtgaggatggtcgtctgctc
ctggcagagctcctcctgcatttgaggcgttttgacatcctgagaaaggtgttcagttac
agcagagctgaggtggaggagactctaaaacacagggaggtgctgccaagattcagagta
ctgattgctaatataagtgaggatatggccagtgaagatctgaaaagtgtgaaattcctg
ttaggcagcacattgcctcgtgaaaagacagaaaaagcaaagaatttcctggacgtagtt
actgaactggagaagttggataaagtttcacctgaaagggtggagttagtagaagaatgc
ttaagacatattgacaggattgacctggccaaaaaagtgaatatgtacaagacatcagtt
gtaacatctgaacaacgttcatgtcaacagcaaagttacagttttcctcttcaatccccc
actccaaatagtacccaatctccacaacaaacaagactggtacagtcccgtcacattgtc
caagaaaaaataccagtgcctatatacagagagaagaactatcggagtccactagattgg
tacaaatttaacagtgatcccagaggagtatgtgttatcatagactgtgtgggcaatgac
ggagagatgctggaacatacatttaaggctcttcacttcaatgtggtccttcacaaattg
cttagtgtggatgacacgctttcaactctcagaaggattttcagacagagagagaaccac
agaggtgacggctttgtctgttgcatcattagccgcggcacagccagtcatcttctggct
acagactcgtatggcatgggtcttcgtcttgacactgtcaggcagcttttcactgcggat
gaatgccccatgttggctggcaagcctaagctcttcttcatccagaggtacagcatccct
gagttccagccctatgccaggatgcagcatcgggacaaggatctggagacagatggttgt
gatgggctgtccaggggtaattcagtccctacagatgcagatgtcttctggagtcactgc
tggacagatgaacgtcacctgcaacaaggacatcatcgctccatctacctgaaggctctg
acagatgccttacacaaaggccagagaaggaaaacatctcttattgatgctcatcttgag
gtgaacagggccatctatgaacacaacaatgggaatcctggagaagattaccacatcgat
ctgaaacatactctaaggaaagagcttcacttacaatag
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