Scomber scombrus (Atlantic mackerel): 133993110
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Entry
133993110 CDS
T10651
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133993110 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133993110 (herc3)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133993110 (herc3)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
HECT type E3
133993110 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
TMEM240
EKLF_TAD1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
133993110
NCBI-ProteinID:
XP_062287959
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All DBs
Position
2:23149786..23180769
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AA seq
1048 aa
AA seq
DB search
MLCWGNAKEGQLGIGVERNPMFEPRSCQVFSGRGLIEVACGGQHSMFLLHDGSVYTCGSN
SCGQLGHDKPGTSPELVGALDTQKITMVSCGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EAAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGEEHTAALTKDGGLFTFGDGSWGQLGHASTNNELLPRRVLELMGTEVSQITC
GRQHTLAFVPSSGMVYAFGCNSHGQLGTGVLGDARSPSPAKTSFLTGNSNKTEFKQCTVT
KIICGGDHSFLLYSNEQSSAPPEDFRVINISKTLSPINYERLNSWRLKLMYTTDSSVKNE
IIIQLSSTACWNASFLDQSDDAHFKTNPKIPGINLNYVRTLFDTLNEPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWSLVDGSVFIRMVDMYKSIVVFMLMAGKTLLVPVFYENYFLATLRLLEKLHKVNLKAH
HVEYNRFYIPDISSLVDIQEDYLKWFLSKAEIKMGSSPTQSDFPPVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVLMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCF
VEHNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVATTLEDFMELSPTEARSLQQLL
DYEGSDVEETFVLNFAITRENYGLTEVKELVPGGESLSVDKNNRKEFVEAYLRYVFSVSA
SEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEYSATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKDTLHRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggtaatgcaaaagaaggacaattgggtatcggtgtggagaggaacccc
atgtttgagcccaggagctgtcaggtgttcagtggcaggggactaatagaggtagcgtgt
ggaggacaacactcaatgttcctgctgcatgacggcagtgtgtacacatgtggctctaac
agctgtgggcagctgggccacgacaaaccagggacttccccagagttagtaggagctctg
gacactcagaagataacaatggtgtcgtgtggtcgggcccactctatggcggtgaatgag
cagggccaggtgttcgcctggggagctggtgaagggggccagctcggtctggggactgca
gaggcggccgttcgaatcccaaggttggtcaaaaggctgtgcgaccaccgcatctctcaa
gtcatgtgtgggaatcaacactgcatcgcactttctagagatggccagctgttcacgtgg
ggccagaacactagcggtcagctcggtctggggaaaggagagcccagcaagctgttccct
catccactgaagtctctggcgggaattcctttggcacagatcacagctggaggagatcac
agctttgcactttctttgtcgggagctgtgttcggttggggaaagaacagagcgggacag
ctgggtctcaatgataaacaagatcgcgctgtcccttgccacattaaatttttgagatct
caaaaagttgtttacatcagctgcggagaagaacatacagcagcactcacaaaggatggt
ggtttgttcacatttggtgatggttcgtggggtcagttggggcacgcctccaccaataat
gaacttttacccagacgagtgctggagctcatgggcactgaggtgtcccagatcacctgt
ggcaggcagcacacgttggcgtttgtgccttcctctggtatggtgtatgcatttggttgt
aacagccatggccagctgggtacaggagtactgggagatgccagaagcccgtctcctgcc
aagaccagtttcctgactggaaattcaaataaaacagaatttaaacaatgtacagtgacc
aaaatcatctgtggaggagatcatagtttcttattgtactctaatgagcagagttcagcc
cccccagaagacttcagagtgattaatatcagtaaaactctttccccaattaattatgaa
agattaaattcgtggaggttaaagctgatgtataccacagattctagtgtcaaaaatgag
atcataatccaactctcctctacggcttgctggaacgctagcttcttggaccaaagtgat
gacgcccacttcaaaaccaacccaaagatcccaggaatcaatctcaactatgtcagaacg
ctttttgatacactcaacgaaccagccttctctggacttctggagcaggccagcaagagt
tttgagagtctgttgatcccccagctgccccgatctcctcctgatgtcgaggccatgagg
atctacctcatcttgtctgagtacccagctctgcaggactccaagaactacattcgcctc
accattcctctggcaatggccatcctccggctagacgccaaccccagcaaagtattggat
aactggtggagcttagtggacggcagtgtgtttatcagaatggtcgacatgtacaagagc
atcgttgtgttcatgctaatggctggcaagaccctgctggtacctgtgttctacgagaac
tattttctcgccacgctaaggctgctggagaaactccacaaggtcaacttaaaggcccac
catgtggagtacaaccgcttttatatccctgacatcagcagcctggtggacatccaggaa
gactacctcaagtggtttctgagtaaagctgaaattaaaatgggatcatctcctacgcag
agtgacttccctccagtgaacctatgtgcctacccgttcatactgaacgctcaagccaag
acaaccatgctgcaaacagacgctgaactgcaaatgcagatggcagtaagcggtgcaaac
ctacacaatgtcttaatgctactcacactggagccccacctcgctaggaatccttacctg
gtgctccacgtgcgcaggaaccatttagtcagcgacacgttacgagagctcaccatgtac
tctgatgtggacctcaagaagccgctcaaggtgatctttgatggagaggaggctgtagac
gcaggcggagtaacgaaggagttcttcctgctgctgttaaaggagctgatggatcctgta
tatgggatgttcactcattataaagagtccaacctgctgtggttctcagataaatgtttt
gtggagcacaactggtttcacctgatcgggatcatctgcggtctggccatctataactcc
acagtggtggacctccatttcccgctggctctctataagaagctgctggacgtggcgacg
acgctggaggacttcatggagctctcgcccaccgaggccaggagtctacaacaacttcta
gactatgaaggaagtgatgtggaggagacgtttgttctcaacttcgctatcacgagagag
aactacgggttgacagaggtgaaggagctcgtccctggaggagagagcctcagcgtggac
aaaaacaacaggaaagagtttgtggaggcctacctgcgctacgtgttctcagtctcggcg
agcgaacagtactcggccttctcatcgggcttcctgaaggtgtgcggaggggagatcctg
tctctgttccagccctctgagctgatggccatggtggtcggcaacaacaactacaattgg
gaggagatggagaagaacgccagctacaaaggggagtattcagccactcatccaacagtc
cgattgttctgggaggtctttcacgagttccctctggagaaaaagaagcagttcttattg
ttcctgaccggcagcgaccgtattcccatccacggcatggagagcctgcgtatcgtcatc
cagtccacaacggcggaggagcactacctgccggtggcccacacctgctacaacctgctg
gacatgccccgctaccagaccaaagacaccctgcaccgccgcctcacgcaggccgtggag
cagtacgaaggcttcagcctggtctga
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