Scomber scombrus (Atlantic mackerel): 133993149
Help
Entry
133993149 CDS
T10651
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133993149 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ssco04050
]
133993149 (edar)
Cytokine receptors [BR:
ssco04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
133993149 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
133993149
NCBI-ProteinID:
XP_062287998
LinkDB
All DBs
Position
13:18685459..18710515
Genome browser
AA seq
517 aa
AA seq
DB search
MSERRGQTKSIFLSSLLVCCMFASAEYSSCGEYEFLNQTSNSCQACPQCQPGQEPHMTCG
YGVKDEDFACVPCPQGKYSKGKYEICRRHKDCDALYKATVRVAGTPDSDAECGPCLPGYY
MLENRPRNLYGMVCHSCQNAPPNTKECMPTSGQIEKPQIDPGSTTVFPNPHKDSTGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVAKAVEAQSNKQEDKKDVPD
NVVIYSEKDEFDKLKAPPQKTVKSENDASSENEQLLSRSMDSDEEAALEKQGSAETTNPN
PNLCLVNLGNKPDLCLLSLGLLDRERACNGTPNITASPTNNVQSPNHIGNVNHIASSVTA
INNNNKTPGMLQSRRKKILDLYARACNVTEGLSPTELPFDCLEKASRMLSSSYSSEAAVV
KTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLCSDV
LGSNEMAAAGGRQISSFHSQLVCTSPFPSPSQRCASV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaggtcagacgaagtccatctttctgtcctcgttattggtgtgttgt
atgtttgcgagtgcggagtattccagctgtggagagtacgagtttttaaaccagaccagt
aacagctgccaggcctgccctcagtgccaaccagggcaggagccacacatgacctgtggc
tacggtgtgaaggatgaggactttgcctgtgtgccgtgcccacaggggaagtactccaaa
ggcaaatatgagatctgcagacgacataaagactgtgatgccctctacaaagccacagtg
cgtgtagcgggaactccagacagcgatgcagagtgtggaccctgtttaccagggtactac
atgctggagaacagacccagaaacctctatgggatggtttgccactcctgtcaaaatgca
ccacccaacaccaaagaatgcatgccaaccagcgggcaaatagaaaaacctcagattgat
cccggcagcacaactgtgttccctaatccacataaagattccacaggacagggtcaccta
gcaacagctctcattatcgccatgtcaaccatcttcattatggccatcgccatcgtcctc
atcattatgttttatatcctgaaggccaaaccaagtggccaggcatgttgctctggacag
gtggcgaaggcagttgaagctcaatccaacaaacaggaagacaagaaagatgtccctgac
aacgttgtgatctactcagagaaagatgagtttgacaaactgaaagctcctcctcagaag
acggtgaaaagtgaaaatgacgcatcgtcagagaacgagcagctgctgagccgtagcatg
gacagcgatgaggaggcagcgttggagaagcaaggatcagccgaaaccactaaccccaac
cccaacctgtgcctcgtcaatctgggcaacaagcctgacctctgcctgctctctctgggc
ctcttggaccgcgaacgtgcctgcaacgggacccccaacattactgccagcccgaccaat
aacgtccagagccccaaccacattggcaatgtcaaccacattgccagcagtgtgaccgca
atcaacaacaacaataaaaccccagggatgctacagagtcgaaggaaaaagatcctggat
ctgtatgccagagcgtgcaatgtgacagagggcctgagccccacagagcttcccttcgac
tgcctggagaaggccagccgcatgctgagctcctcctacagcagcgaggcggccgtggtg
aagacgtggagacacctggccgagagcttcggcctgaaacgcgatgagatcggtggcatg
agcgacggcctgcagctctttgagagggtgagcacagcgggctacagcatccccgacctc
ctgacccgcctggtacagatcgagaggctggatgctgtcgagtcgctctgctcagacgtg
ctgggcagcaatgagatggcggcagcaggcggacggcagatcagcagttttcacagccag
ttggtttgcacgtcccctttcccgtccccctcccaacgctgtgccagtgtctaa
DBGET
integrated database retrieval system
