Scomber scombrus (Atlantic mackerel): 133993150
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Entry
133993150 CDS
T10651
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04340
Hedgehog signaling pathway
Brite
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
133993150 (spopla)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
133993150
NCBI-ProteinID:
XP_062287999
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Position
13:20588944..20602939
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccaccccccctcctcctggggagatgtcaagtggacctgtggcagaa
agctggtgttacacacaggtcaaagttgtaaagttttcctacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggtgaggtgttgaaaagctcaaccttctcctctggc
cctaatgataaaatgaaatggtgtctgcgagtcaatccaaagggacttgatgatgaaagc
aaagattatctgtcattgtatttacttcttgttagttgtccaaaaagtgaagtcagagca
aagttcaagttttctttgttgaacgctaaaagagaggagacaaaagcaatggaaagccaa
agagcatacaggtttgtccaaggcaaagactggggcttcaaaaaatttatcagaagagat
ttcctccttgatgaagccaatggtcttctgccagatgacaagctcaccctgttctgtgag
gtaagcgtcgtccaggactctgttaacatttctggccagtccaacatgaacatgctgaag
gtaccggagtgtcagctgtctgatgacctggggaacctgtgggagtgttcacgcttcaca
gattgcagcctttatgtgagagggcaggagttcaaagcccacaaatcgatccttgcagca
aggtccccggtctttaatgctatgtttgaacatgaaatggaagaaagtaaaaagaaccgt
gttgacattagcgacgtagacccagatgtctttaaggaaatgatgggctttatctacacg
ggaaaggctccaaacctggaaaaaatggcagacaatttgctggcagctgcagacaaatat
gcgctggagcgtttaaaggtcatgtgtgaagaggccttgtgcaacagcctttcagtggag
aatgtggccgacaccctcatcctagcagacttgcacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcatgctacggatataatggagactgcaggctggaagtcaatgatc
caatcccaccctcacttggtagccgaggcctttcgtgccctggcttcagcacagtgccca
ccctttggtctacccaggaagcgtctaaaacagtcctga
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