Scomber scombrus (Atlantic mackerel): 133993200
Help
Entry
133993200 CDS
T10651
Symbol
sp5a
Name
(RefSeq) transcription factor Sp5a
KO
K09195
transcription factor Sp5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133993200 (sp5a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
133993200 (sp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
DUF8259
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
133993200
NCBI-ProteinID:
XP_062288062
LinkDB
All DBs
Position
13:15745042..15746554
Genome browser
AA seq
375 aa
AA seq
DB search
MAAVAVLRNETLQAFLQDRTPNSSPENCKHSPLALLAATCNRIGHHHGSNHTDFIQVPYD
PTLSSPSRLFHPWTNEGNHQSSLASNSTFGLSTKPQLSAHIQSSFSSHHELPLTPPADPS
YPYDFSPVKMLPCSMQSLQSTCPPTYVPAVSYAAPTPIPPAMPSFVTGPSGLVHQQQRQL
SPNPGEDIPWWSLQQGNHVSHSSSLGPHRFQLQRGLVLGHTDFAQYQTQIAALLHTKSPL
ATARRCRRCRCPNCQSSTSSDEPGKKKQHICHIPGCGKVYGKTSHLKAHLRWHSGERPFV
CNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPDCCKRFMRSDHLAKHVKTHQNKKSKCHD
KTLDYVKREDTRNML
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtggctgtactgcggaatgaaacactccaggcttttctccaggatcgcact
ccaaactcttctccagagaactgtaagcactctccactggctctcctggcggccacttgt
aaccggatcgggcatcaccacggatcaaaccacacagatttcatccaggtcccttacgac
cctactctgagctccccttcgcgtttatttcacccgtggactaacgagggcaaccatcag
agcagtctggctagcaactccactttcggactatctaccaagccccagctgtctgcgcac
atccagagctccttcagctcgcaccacgaactgcccctcacccctccggcggacccctcg
tacccctatgacttctcccctgtgaagatgttaccttgctccatgcagtctctgcagtcc
acctgccctcccacctatgtccccgctgtcagttacgcagccccaactcccattccgccc
gcaatgccaagttttgttacgggaccctccggccttgtgcaccagcagcagagacagttg
tccccaaaccctggagaggatattccgtggtggagcctccagcaggggaaccatgtaagc
cactcttcctctcttggcccgcatcgcttccagctgcagagaggcttggttctgggacat
acggactttgcgcagtatcagacgcaaatcgcggctctgctgcacaccaagtctcctctc
gcaactgcgcggcggtgcaggaggtgcaggtgtccgaactgccagtcctccacgtccagc
gacgagcctggcaaaaagaaacaacacatttgtcacataccgggatgcgggaaagtttat
ggcaaaacttctcacctcaaagcgcacctgaggtggcactctggagagcggccgtttgtg
tgcaactggctgttctgtggcaagagtttcaccaggtcggacgagctgcagagacacctg
aggactcacacgggggagaagcgctttgtatgcccggactgctgcaagaggttcatgagg
agtgaccacttggcaaaacatgtcaaaactcaccagaacaaaaaaagcaagtgccacgac
aagacacttgactatgtcaaaagggaggacacgaggaatatgttgtaa
DBGET
integrated database retrieval system
