Scomber scombrus (Atlantic mackerel): 133993233
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Entry
133993233 CDS
T10651
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133993233 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133993233 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133993233 (tnfsf13b)
04090 CD molecules [BR:
ssco04090
]
133993233 (tnfsf13b)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Tumor necrosis fators
133993233 (tnfsf13b)
CD molecules [BR:
ssco04090
]
Proteins
133993233 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
133993233
NCBI-ProteinID:
XP_062288110
LinkDB
All DBs
Position
13:complement(11843375..11846348)
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AA seq
264 aa
AA seq
DB search
MGPAMAVLAGVQSGTGQKTGEGRLSWPVFLLTLAAVTSSSLSALSLYQLVALRAEVEGLK
SEVYRRREEGQEVKHGGQTENISSRRGSQEPLHQPGSQQAFTHTRRKRMVSGTETLVSQP
CLQLLANNSRKTFRKDFALEPHTGIPWQTGLRRGSALEADRDSILVREEGFYFVYSQVYY
MDTTFAMGHVVIRRKRNVVGDEPQYVILFRCIQNMNPVYPYNTCYTGGIVKLEAGDNLEL
LIPRSTAEVSLDGDATFVGAVKLA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggacccgcaatggcagttttagcaggcgtgcagtctgggactggacaaaagacaggt
gaagggaggctgtcctggccagttttcctgctgacactagctgcggtcacctcctcttct
ctttcagctctgtctttgtaccaactggtggctctcagagctgaggtagagggactcaag
tcagaggtttatcgcaggagagaagagggacaagaggtcaagcacggaggccagactgag
aatataagtagcaggagaggcagccaggagccgctgcaccagccaggctctcaacaggct
ttcacccacacaaggaggaaaagaatggtctctggaacagagacattagtttctcagcca
tgcctgcaattgctggcaaacaacagcaggaaaaccttcaggaaagactttgccctggag
ccacacacaggtatcccctggcagactgggctgaggagaggctctgccttggaggcagac
agagacagcatattagtcagagaggagggtttctactttgtgtacagtcaggtctattac
atggacaccacctttgcaatgggccatgtggtgatccggaggaagaggaatgtagtggga
gacgagcctcagtatgtgatcctgttccgctgcatccagaatatgaaccctgtctaccct
tacaacacctgctacacaggaggtattgtgaagctggaggccggggacaacttggagcta
ctgatccctcgttccacagctgaagtgtccctggatggagacgccacctttgtaggtgct
gtcaaactggcttaa
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