Scomber scombrus (Atlantic mackerel): 133993336
Help
Entry
133993336 CDS
T10651
Symbol
abcb6b
Name
(RefSeq) ATP-binding cassette sub-family B member 6
KO
K05661
ATP-binding cassette, subfamily B (MDR/TAP), member 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133993336 (abcb6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133993336 (abcb6b)
Transporters [BR:
ssco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
133993336 (abcb6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
RsgA_GTPase
nSTAND1
AAA_29
Zeta_toxin
SbcC_Walker_B
YobI-ATPase
nSTAND3
AAA_15
MMR_HSR1
ABC_ATPase
DUF815
VapE-like_dom
DHFR_1
Motif
Other DBs
NCBI-GeneID:
133993336
NCBI-ProteinID:
XP_062288234
LinkDB
All DBs
Position
13:6253622..6287093
Genome browser
AA seq
638 aa
AA seq
DB search
MADDNVKSRRGEGKSGCVNVEIQQSSSPFPTAWKGLGKNVELLLPYVWPKGSSALQGLVL
VCVGLLAAERLVNVLVPVYSKNIVNELSAGGSWTSLVITVCIYTLLKFLQGGGAGTSGFI
SNLRQFLWIRVQQFTSRGVQVRLFSHLHGLSLRWHLERHTGDVLRSVDRGTSSINSLLSY
ILFSILPTICDIIIAIIYFVSYFSVWFGLIVLACMVLYLTCTILITEWRTKYRREMNNQD
NNAKSRAVDSLLNFETVKYYNAEDYEVRCFEEAILKYQRCEWKSSASLALLNQTQNVIIG
SGLLTGSLLCAYLVSKGQFQVGDYVLFGTYIIQLYTPLNWFGTYYRLIQSSFVDMENMLA
LLTVQKEVQDIEDAQDLQLTAGQVEFDRVSFSYVSGTEVLRDVSFTVKAGQTIALVGPSG
SGKSSILRLLFRFYDPQSGCIRIDDQDISRVRQSSLRTHIGVVPQDTVLFNDTIGNNIRY
SRVTASQEEVEKAATAADIHTRILELPQGYETDVGERGLKLSGGEKQRVAIARTILKDPQ
IILLDEATSSLDTQTERNIQASLAKVCTNRTTIVVAHRLSTIVEADQILVVLNGQIAERG
RHEELLVQGGLYAAMWMKQQKGLDTQTETQIQNQTPDT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgataatgtgaagagtagacgaggagaggggaaatccgggtgtgtaaatgtt
gagatccagcagtcttcctctccctttccaactgcgtggaaaggtttggggaagaatgtg
gaactgctgttgccatatgtctggcccaaaggctcctctgccctgcagggactggtgctg
gtgtgtgtgggcttactggcagcagagcgactggtcaatgtattggtacccgtttactcc
aagaacatcgtgaatgagctgtctgcaggaggcagctggacttcactggtcatcactgtc
tgcatctacacactgctgaagttcctacaaggaggaggggcaggtacttctggtttcatc
agcaatcttcgtcagtttctgtggataagagttcaacagttcaccagcagaggcgttcag
gtgcgtttgttttcccacctccatggcttgtctctgcgctggcacctggagagacacact
ggggacgtgctgaggagtgtcgaccgaggcacctcatccatcaacagcctgctgagctac
atcctgttcagcatcctccctaccatctgtgacatcatcatcgccatcatttactttgtc
tcctacttcagtgtctggttcggactcatcgttctcgcctgcatggtgctttacctcacg
tgtaccatcctgatcacagagtggaggacgaaatataggcgagagatgaacaatcaggac
aataacgcaaagtccagagccgtagactcgctgctcaattttgagacggtgaaatattac
aacgctgaggactatgaagtccgctgctttgaggaagccattctgaaatatcaacggtgt
gaatggaagagctcagcgtccctcgcactgctgaaccaaacacagaatgtcatcataggg
tcgggactgctgactggatctctgctctgcgcctacctggtctccaagggacaattccag
gttggagattatgttctgtttggaacctacatcatccaactgtacactcctctgaactgg
tttggtacctactacaggctgattcagagctcatttgttgacatggagaacatgctggct
ttgctgacagtgcagaaagaggtgcaggacattgaggatgcgcaggacttgcagctcaca
gcaggtcaggtggaatttgacagagtctctttcagctacgtgtcgggcactgaggttctc
agagatgtcagctttacggtgaaggcgggccagacaattgctctggttggtccatctgga
tcaggcaaaagctccatcctgcgtctgttgttcagattctacgaccctcagagtggctgc
atccgcatcgacgatcaggacatctccagggtgcgtcagtcttctctgaggacacacatc
ggagtggttccccaggataccgttctcttcaacgacaccatcggcaacaacatccgctac
agccgagttacggccagccaagaggaggtggagaaagctgccacggctgctgacatacac
accaggatactggagctacctcagggttatgaaacggatgtgggggagcgtggtctgaag
ctcagtggtggggaaaagcagagagtggcgatcgctagaaccatcctgaaagaccctcag
atcattctgctagatgaggccacttcctcactggacacacagactgagaggaacatccag
gcttcactggccaaggtctgcaccaacaggacgactatagtggtcgcacacaggttgtcc
actattgtagaggcggaccaaatcctggtagttctcaacggacagatcgcagagagagga
aggcatgaggagctgctggtccagggaggtctgtatgcagccatgtggatgaaacagcag
aaaggtctcgacacacaaacagaaacgcagatccaaaatcagactccagacacttga
DBGET
integrated database retrieval system
