Scomber scombrus (Atlantic mackerel): 133993359
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Entry
133993359 CDS
T10651
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133993359 (impg2a)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
133993359 (impg2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
133993359
NCBI-ProteinID:
XP_062288258
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Position
13:9769006..9787307
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AA seq
1143 aa
AA seq
DB search
MGYLDLPYSPEPVVFPRIVQVSDAKVSQEGHVAITRRKRNILFPSGVKLCAQETVQQVVA
NHLSYFHLRVCQETIWEAFKIFWDRLPEQEEYQSWMNQCQEGTVMAKDIGSYFSQSEEHQ
ALVKKRMSRTGLKSAPTPATPEAAPEQEHKADGEEEGEAAAVVPEVEESPLDNDIGLQPP
TPPVLEQVVELSIHLNGQMYSDDLGNPASLQYQTLSRQLAERIEDALVGLPGFKTVSVLD
FRPQKDVQGLDGIVVDYAVTVVVDGAGVSTEQLDYLTLQSNLVENSYHEVKEIPTVIYTI
TEFKNVGTEALHKDELEESVSEIPVSVNTADGATATPVQVSVADEPPEVLILEEDTEDVN
DEFLPELPESNTATTAENDVIVLEESAVIPAAPVLTTEAPEAGSIEEEGLLLEETLQTAD
VEISPEEELPAELPPPELPEVITLPEPPVEIEASGSGTGDLDDLLPPSTPTVAEEDISLD
ETASEDVLIPEDVGIDAGDISDKEMEEVEVEVAVVEEEHTAEDVEAPEEEHLDEVVVNEA
ESPEELEISTISNETTEGEGLTAVLPTPDAVDVVSEASEPEAAETTLLPVGEDSVESVED
SNLTDVLLVDEEVNTEQPEEDSNVVLSYPEEPVLEEGGMEAPTESERQEVIEETPPEAPA
VVEGGPEAPQISTEDLTEDEILIVNQDEQEPPVTDSLSPIQPTVLSPEKESPFTRISDVN
PASDGQPDIIIPTLVEIQTLDEDLDDASLEDQGFDVVHYGYGLINHTEEGSTGFPISVGH
GTDQASIAMPVNPGRALMVFFSLRVTNMIFSDDLFNKSSPEYKALEQRFIELLVPYLQSN
LTNFQNLEILNFRNGSIVVNSRMKFGKPVPQGVTTAVYLILEDFCNTAYQTMNLAIDKYS
LDVESGDKADPCKFQACNEYAECKVNKWSGEAECVCNPGYFSVDSLPCQSICELRNDFCL
NDGKCDVIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVIFF
LARTLRDQYDKDESEDPIRRAESLPSLERATKYNPMFESEATTGYSNYYRRYPEAPVYSS
ASAEASTDFSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFADFVRHHQAVLDTRES
SST
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctagatctgccttatagtccagagcctgtggtgtttccacgcatcgttcag
gtatctgatgccaaggtatctcaggaaggccatgtggctatcactcgacggaaaaggaac
atcctatttccaagtggagtcaaactgtgcgcacaagagacagttcagcaggtggttgca
aaccatctgagctactttcatctcagagtgtgccaggagaccatatgggaggctttcaag
atcttctgggaccgcctcccagagcaagaagagtaccaaagctggatgaaccagtgccag
gagggaacagtcatggcaaaagatattggcagctacttcagccaatcagaagagcaccag
gctctggttaaaaagagaatgtcacggacaggtttgaaaagtgctccgacaccagctaca
ccggaagctgctcctgagcaagaacacaaagctgatggagaagaagagggggaagcagct
gctgttgtcccagaggttgaggagagtccactggacaatgacatcggcctgcagcctccc
actcccccagtgctggagcaggtagtggagctgagcatccacctgaatggacagatgtat
agcgatgaccttggcaatccagccagcctgcagtaccaaacactgagcagacagcttgct
gaaaggatagaggatgcgttggtggggcttcctggatttaagactgtgtccgtgctggac
ttcaggccccaaaaggatgtccaagggctggatggcattgtggtggactatgccgtaaca
gtggtggtggatggtgctggtgtgagcactgaacaactggactacctgaccctgcagtct
aacctggtggagaactcataccatgaggtcaaagaaattcctacagtgatctacaccatc
accgagtttaaaaacgttggcactgaagccctgcataaggacgagttggaggagagcgtg
tctgagatccctgtgtctgtcaatactgcagacggagccacggccacaccagttcaggtc
agtgttgctgatgagccaccagaggtcttgatcctggaggaggacacagaggatgtcaac
gacgaattcctgcctgagttgcctgaaagcaacacagcgacaacagcagaaaatgatgtc
attgttctggaggagagtgctgttatacccgctgctcctgtcctgaccaccgaggcacct
gaagctggcagtattgaggaggaaggtctgctgctggaggagactctgcagactgctgat
gtagagatctccccagaagaggagcttccagctgagctcccccctcctgagctgccagag
gtcatcacactgcctgaaccgccagtggagatcgaggcctctggctcaggcacaggggac
ctggacgacctgctccctccatctacaccaacagtagcagaggaagacatttctcttgac
gagacagcttcagaagatgtgttgataccagaagatgtcggcatagatgcaggtgatatc
tctgacaaggaaatggaggaggttgaggttgaggttgcagtagtggaagaggagcatact
gcagaagacgtggaagctccagaagaggagcatctggatgaggttgttgttaatgaggca
gagagtccagaggagcttgagatctccacaatttcaaatgagaccacagaaggagaaggt
ctgactgcagtactcccgaccccagatgctgtagatgtagtgagtgaagcatcagagcca
gaggcagcagaaactactctgcttcctgttggcgaagactcagtggagtcagtagaagat
tcaaacctcacagatgttctacttgtagatgaggaagttaatactgaacagcctgaggaa
gacagtaatgtggttttgtcctatcctgaggaacctgtgttagaagagggtggcatggag
gcaccgacagagagcgagagacaagaggtgattgaagagactccacctgaagctccagct
gtagtggaagggggcccagaagctccacagatctcaactgaggatcttacagaggatgag
atcctaatagtcaaccaggatgaacaagaaccaccagtgacagattctctaagtcctatc
caaccaactgtcctgtctccagagaaggagtcgccttttacccgtatatctgacgttaat
cctgcctccgatgggcaacctgacatcatcattcctacactggtggagattcagaccctt
gacgaagatttggatgatgcctcccttgaagaccagggctttgatgtggttcattatggt
tatggtttgatcaaccacacagaggagggcagcactggatttccaatcagtgtgggacat
ggcacagaccaggccagtatcgctatgcctgtaaatccaggacgagcactgatggtgttc
ttcagcttgagggtgaccaacatgatcttctcagacgatctctttaacaagagttcccca
gagtacaaagctttggagcaacgcttcatagaactgcttgtgccctacctgcagtccaac
ctgaccaactttcagaacctggagatcctgaactttaggaacgggagcattgtggtcaat
agccggatgaaatttggcaaacctgttcctcaaggcgtcaccacagctgtctatctgatc
ctggaagacttctgtaacacagcctaccagaccatgaacctggccatcgataagtactcg
ctggatgttgagtcaggagacaaggcagacccctgtaaattccaggcgtgcaacgagtac
gcagagtgtaaggtgaacaagtggtcgggggaggcagagtgcgtctgtaaccctggttac
ttcagcgtggatagcctaccctgtcagagtatttgtgagctcaggaacgacttttgcctc
aatgacggcaagtgtgacgtcatcccaggccagggagccatctgcaggtgtcgggttggg
gagaactggtggtaccgaggagagcactgtgaggagtacgtgtccgagccactcgtggtc
ggtatagcaatcgcctctgtagctggattcctattggtggcctctggtgtgatcttcttc
ctcgccaggacgttacgagatcagtatgacaaggatgagtcagaggaccctattcggcga
gcagagtctctcccatctctagagagggcgaccaagtacaaccccatgtttgagagcgag
gccaccacaggctacagcaactactaccgccgctatcccgaggctcctgtctacagcagt
gccagcgctgaagcctccactgactttagcagcgaggagatacgacacatttatgagaac
agtgaactgaccaaggaggaaatccaagacaggatacgcatcattgagctctacgctaag
gatcggcagtttgcagattttgtgcggcatcatcaagctgttctggatacgcgagagagc
tcctcaacatag
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