Scomber scombrus (Atlantic mackerel): 133993420
Help
Entry
133993420 CDS
T10651
Name
(RefSeq) glypican-6-like isoform X1
KO
K08112
glypican 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssco00535
]
133993420
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133993420
Proteoglycans [BR:
ssco00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
133993420
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Others
133993420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Fz
DUF5856
Motif
Other DBs
NCBI-GeneID:
133993420
NCBI-ProteinID:
XP_062288346
LinkDB
All DBs
Position
13:13226124..13316845
Genome browser
AA seq
563 aa
AA seq
DB search
MLRLETIICTFSMLSFAARADFKARNCSEVREACIGKGFSFTHVPAQEIPGEHLRVCAQG
NTCCTQEMEDGFGQQSKQDFGNLSDTMSHELRSTFVSRHKRFDEFFLELLENTERSLHEM
FVRTYGKPYMQNSEVFANLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EEYLECISKYTDQLKPFGDVPRKLKAQITRAFIAARTFVQGLSVGREVAQRVSKVSSSPP
CIRALTKMLYCPFCQGMPTVKPCKNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSAQVSYRVFQGCGQPKSSGMTRSTRGVSDVFSAR
FRPYSPEERPTTAAGTSLDRLRIIWNAMQHSVVDIKEKLKLSKKFWSSLPEAMCVEDRVT
AGNASDEECWNGHTKGRYFPEVQKDGLTNQLNNPEVGVDITRPDTLIRQQIMALRVMTTK
LKNAYNGNDIYFQDSSDEGSGSGSGSGYTEVYPTDMDAAASEAPVVEADRSGPVDGSALL
CAPSVALPTMLALSTLALYRQWR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctcagactagagaccatcatttgcactttttccatgctgtcttttgcagcaagagca
gattttaaagcacggaactgcagcgaggtgagggaggcttgcatcgggaaaggcttcagc
ttcacacatgttcctgctcaagagatcccaggtgaacatcttcgtgtatgtgcacaggga
aacacgtgttgcacccaagaaatggaggatggatttggccaacagagtaaacaggacttt
gggaatctgtctgatacaatgagtcatgaattaagaagcacctttgtttccagacataaa
aggtttgatgaattcttcctggagctgctggagaacaccgagaggtccctgcacgagatg
tttgtgaggacgtatggaaagccttacatgcagaactctgaggtctttgcgaatttgttt
gctgagctgaaacgctattacacaggaggaaatgtcaacctggaggaaatgcttaatgac
ttttggtcacgactgctggagcgtatgttcacgctactcaactcccagtacgtcatcaca
gaggagtatctggagtgtatcagtaagtacactgaccagctcaagcccttcggagatgtg
cccaggaagctcaaggctcagattacccgggcattcatcgctgcacgcacatttgttcaa
gggctctctgtcggccgggaggtggctcagcgagtgtctaaggtaagcagcagtccccca
tgtatccgagcactgacaaagatgctgtactgcccgttttgtcaaggcatgccaacagtt
aaaccctgtaagaactactgcctgaatgtcatgaaggggtgcctggccaatcaagctgat
ctggatccagagtggaaccagtacattgatgccatgctgctggtggcacagaggctggag
ggacctttcaacattgaatctgtcatggagcctattgatgtcaagatttcagaggccatc
atgaatatgcaagataacagtgcccaggtttcctacagggtttttcaaggttgcggccag
ccaaaatcctcaggaatgactaggtctacccgtggtgtttcggatgtgttcagcgcccgc
ttcaggccgtacagcccagaggagcggcccaccactgcagctggcacaagcctagacaga
ctgaggatcatttggaatgcgatgcaacacagtgtggttgacataaaagaaaaactgaaa
ctgtccaagaaattttggtctagcctgcctgaggcaatgtgcgtcgaggacagagtgacc
gctggaaatgccagtgatgaggagtgctggaatggacacaccaagggcaggtatttccct
gaagtccaaaaggatggactgaccaaccagttgaataaccccgaggtgggtgtggacatc
acccgcccagacaccttaatccgtcagcagatcatggctctgagggtgatgaccaccaag
ttgaaaaatgcctataatggcaatgacatctactttcaggactcaagcgatgaaggcagt
ggctcgggcagtggcagcggctacacagaggtctaccccacagacatggacgctgctgcc
agtgaagccccagtagtggaagccgaccggagcggccctgtggatggctctgccctgctc
tgtgcaccctctgtagccctgccaaccatgctggccctctcaaccctggcactctaccga
caatggagataa
DBGET
integrated database retrieval system
