Scomber scombrus (Atlantic mackerel): 133993432
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Entry
133993432 CDS
T10651
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133993432 (smarca5)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133993432 (smarca5)
RSF complex
133993432 (smarca5)
WICH complex
133993432 (smarca5)
B-WICH complex
133993432 (smarca5)
NORC complex
133993432 (smarca5)
BRF complex
133993432 (smarca5)
NuRF complex (fruit fly)
133993432 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133993432
NCBI-ProteinID:
XP_062288374
LinkDB
All DBs
Position
2:23736338..23744937
Genome browser
AA seq
1036 aa
AA seq
DB search
MSESENCVEPREEEPTELEEAGGAEEKSDCSDAGKESSSDAGADGQDASSSSSTKTKESA
PGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
AGDNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKTGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGGRDERNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGD
TKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKMKK
QGSRILIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEPNSSKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESDITDDDIDVI
LEKGERKTMEMKEKMCSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPDMPNSAHVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKSSSAQKRK
SEGTPDGRGRRKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagcgaaaactgcgtggagccgcgggaagaagagccaacggaacttgaagaa
gccggaggagcggaggagaagtccgactgctcagatgctggaaaggagtcgtcttcagat
gcaggggcagatggccaagatgcatcctcctcctcctcaaccaaaactaaagaatctgct
ccaggttatgaggagaaagtgcaaacagaccggaccaacaggtttgagtacctgttgaag
caaacagagctatttgctcatttcatccaaccagctgcacagaagacccccacctccccc
ctaaagatgaaaccaggacgtcctcgcattaagaaagatgagaagcagaacctgctgtct
gctggagacaatcgccatcgccgcacagagcaagaggaggatgaagagcttctgaacgag
agcaccaagactactaacgtctgcactcgcttcgatgattctccttcttatgtcaaaaca
ggaaaaatgagggactatcaggtccgtggtctgaactggctcatctctttgtatgaaaat
ggaatcaacggtatcctcgctgacgaaatgggtttgggaaagacactgcagactattgcc
ttgctgggttatatgaagcactacagaaacatccctggtccccacatggtgctggtgccg
aagtccaccctctacaactggatgaatgagttcaagcgatgggtgccgtcactgcgtgca
gtctgcctgatcggaggcagagacgagaggaatgccctgatcagagatgtcctgctgccg
ggagagtgggatgtgtgtgtcacatcttacgagatgctgatcattgaaaaggctgtgttc
aagaagttcaactggagatacctggtcattgatgaagcccacaggatcaaaaatgagaaa
tcaaagctgtcagaaattgtgcgagaattcaagaccaccaatcgtttgctgctgactggc
acaccccttcaaaacaacctccacgagctatgggccctgctaaacttcctgctgcctgac
gtcttcaactcagcagaggactttgattcctggtttgacacaaacaactgcttgggtgat
acgaagttggtggagcgtctccacactgttctgcgtcctttcctgcttcgtcgtataaaa
gctgatgtagagaagactctgctcccgaaaaaagagatcaagatgtatgtgggcctcagt
aaaatgcaacgagaatggtacacaaagattctgatgaaggacattgatattctgaactcg
gcgggtaagatggacaagatgcggctgctcaacgttctcatgcagctgcggaaatgctgt
aaccatccatacctgtttgatggagctgaaccaggtcccccctacaccacggacctccac
ctggtggtaaacagtggcaagatggcggtgctggacaagctgctccccaagatgaagaaa
cagggctcccgtatactcatcttcagtcagatgaccaggatgctggacatcttggaggac
tactgcatgtggagaaacttcggctattgtcgcctggatggtcagacgccacatgaggag
cgacagatctctatcaatgcatacaatgagccaaacagcagcaagttcatcttcatgttg
agcaccagagctggtgggctgggtatcaatctggctacagcggatgtagtcatcctctac
gactcagactggaaccctcaagttgaccttcaggccatggaccgagctcacaggattggt
cagcagaagcaggtgcgcgtatttcgcttcatcactgaaaacacagtcgaggaaaggatt
gtggagagggccgagatgaaattacgcctggactctattgtcatccaacaaggaagactt
gtggatccaagtgcaaacaagctgggcaaagatgagatgctttccatcatccgtcacggt
gccacgcatgtgtttgcctccaaagagagtgacatcacagatgatgacattgatgttatc
ctagagaaaggtgaaaggaagactatggagatgaaggagaagatgtgttccctgggtgaa
agctctttgagaaacttcaccatggacacagagaacagcagcgtgtacacattcgaagga
gaagactacagagagaagaaaaaggttattaccaactggattgagccacctaagagagaa
aggaaagccaattatgctgtggatgcatacttcagagaagctctgcgcgtcagtgagccc
aaagcacccaaggctcctcgtcctcccaagcagccaaatgtccaggacttccagttcttc
cctccacgtctttttgagcttttagaaaaggaaatcctgttctacagaaagaccataggc
tataaggttccccgtaacccagacatgcccaactcagcccacgtccagaaagaggagcag
gctaagattgatgaggctgaggccttgacagaggaggagctggaggagaaggagaacctt
ctgcaacagggattcactatttggaacaaacgtgacttcaaccagttcatcaaagccaac
gagaagtggggaagagacgacattgagaacattgccagagaggttgagggaaaaactcca
gaggaagtcatggaatattctgctgtattctgggagcgctgcaatgagctgcaggatatt
gagaagatcatggcccagatagagagaggagaggccaggattcagagaaggattagtatt
aagaaagcactggactcaaagattggtcgctataaggccccattccatcagctccgtatc
tcctatggcactaacaaaggcaagaactacacagaggaggaggaccgattcctcatctgc
atgctccacaagctgggatttgacaaggagagcgtgtatgacgagctccgtcagtgcatc
cgcaactcacctcagttccgctttgactggttcctcaaatccaggactgccatggagctc
caaaggcgatgtaacaccctgattacactgatagagagagagaacatggagctggaggag
agggagaaggccgagaaaaagaagaggggtccaaagagtagctcagcccagaaacggaag
tctgagggaactccagatggtcgtggacgcagaaaaaaactcaagttgtga
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integrated database retrieval system
