Scomber scombrus (Atlantic mackerel): 133993448
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Entry
133993448 CDS
T10651
Name
(RefSeq) claudin-10-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133993448
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133993448
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133993448
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133993448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133993448
04147 Exosome [BR:
ssco04147
]
133993448
04515 Cell adhesion molecules [BR:
ssco04515
]
133993448
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133993448
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133993448
Exosomal proteins of colorectal cancer cells
133993448
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133993448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF2182
Motif
Other DBs
NCBI-GeneID:
133993448
NCBI-ProteinID:
XP_062288414
LinkDB
All DBs
Position
13:13415814..13417594
Genome browser
AA seq
262 aa
AA seq
DB search
MEKRFIQILGFLISSLGWVFVLCTMAMDYWRITQLGGQGGSFIIKVAWYWSNLWKDCFTD
STAVTNCRDYPVLWSVTPYIQGVRGLLMCGLTLGFFAVVCCFLGMECTYIGGEDKTKDKL
LLAGAVFHFAGSVSDISGYCLYINRIARTSFAPSLAPGVLRYDLGTPIFLGLVGCFLILL
GVVFYAATVYRVIWPESKVVYDYEGGTYMAPRSRGRTLYTGYYRPSRLYGTYYMGSGRSS
SSKISNLSKTTPDKLSDRDAFV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacgtttcattcaaatacttggcttcttgatctcgtcactgggatgggtgttt
gtgctgtgcaccatggccatggactattggaggatcacccagttaggaggccaaggagga
tccttcatcatcaaggtggcctggtactggtctaacctttggaaggactgtttcactgat
tctacagctgtgacaaactgtagggactacccggtgctctggagtgtcaccccttacatc
cagggagtccgaggattgctcatgtgtggtttaactcttggattctttgctgtggtatgt
tgctttcttgggatggagtgcacttacataggtggagaagataaaaccaaggacaaactg
cttcttgcaggagcagtgtttcattttgctggcagtgtgtcagatatctctggctactgc
ttatacatcaataggattgccagaacatcctttgctcccagtttagcaccaggagtctta
cggtatgacctaggaactcccatatttcttggattggtgggatgttttctcatcctttta
ggagtggtgttttatgctgcaacagtctatcgcgtaatctggcctgaaagtaaagtggtg
tatgactatgaaggaggcacatacatggcccctcgctccagaggaagaaccctgtacacc
ggatactacagaccgtccaggctgtatggaacttattatatgggctcaggaagatccagc
agttccaagatctcaaatctttctaagacaaccccagataaactctctgacagagatgca
tttgtgtag
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