Scomber scombrus (Atlantic mackerel): 133993495
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Entry
133993495 CDS
T10651
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133993495
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133993495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
GIP4
SatD
Motif
Other DBs
NCBI-GeneID:
133993495
NCBI-ProteinID:
XP_062288462
LinkDB
All DBs
Position
2:34048065..34052048
Genome browser
AA seq
345 aa
AA seq
DB search
MMSYLKQSPYGMNGLGLSGAMDLLHPSVGYPGNPRKQRRERTTFTRTQLDILESLFAKTR
YPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSNSAKVKPMKKKSSPTRESTGS
ESSGQFTPPAVSSSSSTSSSSSSSSSSSISSGLGGPGMISTSTSVTAPVSSIWSPAPISP
APAPASLPDAAAPTSASCMQRSVSSSTTGGTSSYPVSYSQTAAAYSQGYPGSASGSYFSG
VDCGSYLAPMHSHHHPHHQLSPMTGGSMSGHPHHHISQTSGHHHHHHHPSHHHQAYSAPG
LAFNSTDCLDYKEQSAASAAAWKLNFNAADCLDYKDQASWRFQVL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttatctcaagcagtccccgtacgggatgaacggactgggcctgagcggggcc
atggacctgctgcacccgtctgtgggttaccctggcaacccgcggaagcagcgccgggag
cggaccaccttcacccggactcagctggacatcttggagtcgctgtttgctaaaacgcgc
tacccggacatcttcatgagggaagaggtggcgctgaaaatcaacctgccggagtccaga
gtgcaggtctggtttaaaaacaggagagcaaagtgtcggcagcagcagcagagcagcaac
agcgccaaggtgaaaccaatgaagaagaagtcgtctccgaccagagagagcaccgggtca
gagagcagcggccagttcaccccgccggccgtgtccagctcctcctccacctcctcctcc
tcatcctcctcttcttcctcctccatctcctctggactgggaggacccggtatgatcagc
acctctacctccgtcaccgccccggtgtcgtccatctggagcccggcgcccatctccccg
gccccggcgcccgcctctctgccggacgccgccgcccccaccagcgcctcctgcatgcag
cgctccgtgtcgtcttccaccaccgggggaacgtcgtcctacccggtgtcttacagccag
acggcggcggcgtacagccagggttacccgggctcggcgtccggctcttacttcagcggc
gtagactgcggctcgtacctggcgcccatgcactcccatcaccacccgcaccaccagctc
agccccatgacgggcggctccatgtcgggacacccgcaccatcatatcagccagacgtca
gggcaccaccaccatcaccaccatccgtcacaccaccaccaggcgtacagcgcgcccggc
ctcgccttcaactccacagactgtctggattacaaagagcagtcggcggcgtcggcggcg
gcctggaaactcaacttcaacgccgccgactgtttggactacaaagaccaggcctcgtgg
cgtttccaagtgctgtga
DBGET
integrated database retrieval system
