Scomber scombrus (Atlantic mackerel): 133993553
Help
Entry
133993553 CDS
T10651
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssco03012
]
133993553
Translation factors [BR:
ssco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133993553
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
CLU_N
TPR_MalT
TPR_NPHP3
GSKIP_dom
DUF6340
TPR_2
Motif
Other DBs
NCBI-GeneID:
133993553
NCBI-ProteinID:
XP_062288528
LinkDB
All DBs
Position
14:25639583..25652020
Genome browser
AA seq
1700 aa
AA seq
DB search
MGNIIQCCHTLSDYFKCNDVPIRSEAERSPLLSSEGSECDSSTLPDNLEDDMLTVSTGVT
NPALEPEHFLFPDIILSSNLGGDVALVEPMVCLLVSEEEEGGGGGERVRVGVGQERGNRG
RNRDYTEVETQTEVETQIGMGVQTQTGFQTEVQTQTEMLVPRNETVKREVNTLINTGIAK
EMVGNIWQDDGALKQVDILLEATTSHKIHSDNQSLFAELEVPGKVEKHTKQERNTLVYTG
VTEEGKADEKQKTIQENVFKLQQSTVAVQENTDFAYIEHRTSLQTQEEVKQREQNIESEH
ASLMLTEHDVNNMDENIAAAENNTGIVENLGRAVDLTRQRIQNNERMEQETVVSHQNVNE
KDHNNMSADQIETEKNLHPKKREEDHDAPGLQHVLELDTALPQVEKEEAEMKNVTLLLVD
RLFLAAPHVKAAPPRQTEESPENEGLEQSDVDQMKQLSIRDIVELQETGFTVRIQPPGTE
SFELQVSGQMLVAELQQVLMDHELTCHRTCFSLQLGGAVLESLTELRSIQGIQEGGLIKV
VEDSYSVRDARLHLRHVRDLLRSLDPTDAYNGVNGSSLSYLTFYTRGEKDSESVGKRRAA
EKESVDCSPPEYILPGYKDRLLTPLQPVRGDWKPLQCLRVLTMSSWNPPPGNRKMHGDLM
YLNVLTMEDKELNITSSTRGFYLNQSTSFNFNPKPAVPKILCHSLVELLSQVSPAFRKNF
SALQKKRVQQHPYERIAAPFQVFNWIAPHGDHTLDCVRAEETHTSRMGQDEHTAGQNREW
NEELQGCKELPRSSLEERLHRERILFKTNSDFVAAVTRGAIAVIDGNVMPLNPAEAPHMQ
MFIWNNLFFSLGFDISEHYRPLGGNTAAHAAGICDLRGAQAYTSVDIEGLHLLGTAVVDY
RGIRVIAQTIVPGILEKNQEQNVVYGSNDYGKTVFTHPRFLELLDKTSKPLRIQRHQVLD
HNDSSVELCSGIETKGIMGNDGRPYIMDLLRTFPPDLNFQFSETEERREEVPKECQSFGY
PQRHPHSLASLRPELIEAFVQHRYEVYVKMVSEGLKQLEERPEMIQDKDAGQSDEPVDEP
RAGDTAAAGADMEFHRRNVIIKACKAVGSVSDTCFDIRFNPDVCSPGVCFPSECAEEVQR
QTQLLWDAAAFLLSTQIPAVVRDCLDHMVVPMDGATLTSVLHQRGVNVRYLATLLMEMDR
MEEGDRLKHIQRISIGEVIIRSAKHIFRTYLQDVAPAAFSAAVSHFLNCLLSSTACFPDS
SSDELLTRRRSRRRRSHGSRVAMLTDSVWAKMTPSELWGKIKTEAGHYYHYTIDGDSMDE
VIGKYSFQRISLLREMALKTGIQVQLREYAFESRHRPAFSEEDVVNMFPVVKHLQPTATD
ATLLVQNAQVAVQQGLLKEGYELISQALTLFSSVCGVLHEDVCMCLRLLGRLSYILGDYA
DALSHQEKAVMSSERVQGIDHPQTIQDYTFLALYCFAGGRPSTSLQLLYRARYLALLVSG
EDHPQVAVLDSMLGLVLHGLMEYEVSLKFLQNAFILTSKYHGATSLKNAHSHHLLATVYE
SKGEFRSALQHEKEAYSIYKSQVGENHDSTKESSEYLKSLTQQAVILQKAINSIYSNTPS
ACIPPPKFSIPSLPKILQQLNLTCGIILIPLSEKEIADLRIQLKGKEKVQVKELENQLFK
QNDVITSDNRQHLTMDLDAQ
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatcatccagtgctgtcatacactgtcagactactttaagtgtaatgatgta
ccaatccgcagtgaggcagaacgatccccactgctttccagcgaagggagtgaatgtgac
tcctccaccctgccagacaacctggaggacgatatgctaaccgtctccaccggtgtgaca
aaccctgccctcgaaccggaacacttcctgttccctgacatcatcttaagcagcaacctc
ggaggggacgtggctctggtggagccgatggtgtgtctgttggtgtcagaggaggaggaa
ggaggaggaggaggtgagagggtgagggtgggtgtaggacaagagagaggaaatagaggg
aggaatagggactacactgaggttgagacacaaactgaagtggagacacagattggaatg
ggggtacagacacagaccgggttccagacagaagttcagacgcaaacagaaatgctggtg
cccagaaatgagaccgtgaagagagaagtaaatacactaataaatactggcattgcaaaa
gagatggttggaaatatatggcaagatgatggagcactgaaacaggtggatatactcctg
gaggcaacaacatcacacaagatacactcagataatcaatcactttttgcagagctggaa
gttccaggaaaggtggaaaaacatacgaaacaggagagaaacacattggtgtatactggg
gtaacagaggagggaaaagctgacgaaaagcagaaaacgatacaagagaatgtctttaag
ttgcagcagagtactgttgccgtccaggaaaatacagactttgcctacatagagcaccgc
acttcactgcagacacaagaggaggtcaagcaaagagaacaaaacattgaatcagagcat
gcctcattgatgctgactgaacacgatgtaaacaacatggatgagaacattgctgcagcg
gagaacaacaccggcattgtggagaatcttggccgtgctgtagacctgacacgacaacgt
attcagaataatgaacggatggaacaagagactgtggtgtcccatcagaatgtcaatgaa
aaggaccataacaatatgtcagcagatcagattgaaactgagaaaaacttacaccctaaa
aagagggaagaggaccatgacgcgcctggtctgcagcatgttttggagttggatacagct
ctgccacaggtggagaaggaagaggctgagatgaagaatgtgacattgttattagttgac
aggctgtttctggcagcaccacatgtcaaagcagcgcctccgagacaaactgaagaaagc
cctgaaaatgaaggcctggagcagtctgatgttgatcaaatgaagcaacttagcatccgt
gacatagttgagctccaagagacgggcttcactgtcaggatccaacctcctggaacagaa
agttttgagcttcaggtgtcaggccagatgctggtggcggagctgcagcaggtactgatg
gatcatgagctaacctgccaccgcacatgcttctccctccagctgggaggcgccgtcctc
gaaagcctcacagagttacgctccattcagggcatccaggaaggagggctgatcaaagtg
gtggaggattcttactctgtgcgtgatgctcgtcttcatctcagacatgtccgtgacctt
ctgaggagtcttgaccccacagatgcgtacaacggagtgaacggcagctctctgtcttac
ctcaccttctacacccgaggagaaaaagatagtgaaagtgtggggaagaggcgagctgct
gaaaaggagtctgttgactgcagccctccagaatacatcctccctggatacaaagatcga
ctgcttactccgctgcagccagtcagaggtgactggaagccgttacagtgcctgagggtc
ctgactatgagtagctggaaccctcctcctggaaacaggaagatgcatggggacttaatg
tacctcaatgtcctgactatggaagacaaagaactcaacattacatcctcaacacgtggc
ttctacctcaaccagtccactagcttcaacttcaatcctaaacctgcagttcccaaaatc
ctttgccactctcttgttgaactgttgagtcaggtcagccctgccttcaggaaaaacttc
agtgccctgcagaagaaaagagtccagcagcatccttatgagcgaatcgcagcccctttc
caggtgttcaactggattgcccctcatggagaccacacccttgactgtgtcagagcagag
gagacacacaccagtcgcatgggccaggacgagcacacagccgggcagaaccgagagtgg
aatgaggagctgcagggatgcaaggaactccccagaagctctcttgaggagcgtctgcac
agagagaggatcttattcaagaccaacagtgactttgttgctgctgtgacacgaggtgcc
atagcagttatcgacggtaacgtcatgccgttaaacccagcggaggcacctcatatgcag
atgttcatctggaacaacctcttcttcagcctcgggtttgacatttctgagcactaccgg
ccactagggggcaacactgcagctcatgctgctggcatctgtgacctcagaggagcacag
gcatacacatctgtcgacatagaagggctacacttacttgggacagctgtggtggattat
cgtggtatccgtgtcatcgctcagacgatcgttcctggcatactggagaaaaatcaggag
cagaatgtcgtctacggctctaatgactatggaaaaactgtgtttacacaccccaggttt
ctggagcttctggataaaaccagtaaaccactgagaatccaacgtcaccaggtgctcgac
cacaatgacagctcagtggagctttgctctggcatcgagaccaaaggcatcatgggtaat
gacggtagaccctacattatggaccttctccggacctttcccccagaccttaatttccag
ttctcagagacggaggagaggagagaggaggtgccaaaggaatgtcagagctttggttac
ccacagcgtcatcctcacagcctggccagcctgagaccggagctgatcgaggccttcgtc
caacacaggtatgaagtttatgtcaagatggtgtctgaggggctcaaacagctggaggaa
cgtcctgagatgattcaggataaggatgcagggcagagcgatgaaccagtcgatgaaccg
agagctggagatacagctgcagcaggagctgacatggaatttcacaggagaaatgtgatc
attaaagcttgtaaagctgtcggatcagtgagcgacacttgctttgacattcgcttcaac
cctgatgtttgctctccaggtgtttgtttcccctctgagtgtgctgaggaggtgcagagg
cagacacagctcttatgggatgcggctgcttttctactttctactcagattccagctgtg
gtgagggactgtctcgaccacatggtggtgccgatggatggcgcgaccctgacctcagtg
ctgcaccagcggggtgtgaatgtacgttacctggcaacactgttgatggagatggacagg
atggaggaaggagacagactcaaacacatacagaggatttctattggtgaagtcatcatc
cgaagtgccaaacacatcttcaggacctatctgcaggatgtggcgcctgctgctttctcc
gcggctgtcagccacttcttaaactgcctcctgagctccaccgcctgtttccccgactcg
agctcagacgagctgctcactcgtcgcaggagccgacgacggcgtagccacgggagtcga
gtcgccatgttgacagacagtgtgtgggctaaaatgacccccagtgagctgtggggaaag
atcaagactgaggctggacattattatcactacaccatcgatggtgatagtatggatgag
gttatagggaagtacagctttcagaggatctccctactgagagagatggccctcaagact
gggatccaggtgcagttgagggagtacgcgtttgagtctcgacacaggccggcgtttagt
gaggaagacgtcgtcaacatgtttcctgtggtcaaacatctccaacctacagcaacggat
gccacgctccttgtacaaaatgcacaggtggcagtgcagcaggggcttctcaaagagggc
tatgaattaattagccaggccctgactctgttcagcagcgtgtgtggggtccttcatgag
gatgtgtgcatgtgcctgcgtctgctgggacggctcagctacatcttgggagattacgca
gatgccctgagccaccaggaaaaggctgtcatgagtagtgagagagtacaaggaatagac
cacccacagactatacaagactatactttcttggccctgtactgctttgctggaggtcgg
ccgtcaacctccctgcagctgctgtatcgtgctcggtacctcgccctgcttgtgagcgga
gaagatcatccacaggtcgctgtgctggatagtatgctgggtctagtacttcatggactg
atggagtatgaggtttccctgaagttcctacaaaatgccttcattttaacgtcaaaatac
cacggtgccacatccctgaagaatgcacacagtcatcatctgctcgccaccgtgtacgag
agtaaaggagagtttcgatcggctctgcaacacgagaaagaagcttactcaatatataag
agccaggttggcgagaaccatgacagtacgaaggaaagctcagagtacctgaagagcctc
actcagcaagctgtgatccttcagaaagccatcaacagtatctacagtaacacacccagt
gcctgtattccacctccaaagttttccataccaagccttcctaaaatccttcagcagctc
aacctgacctgtgggataatcctcattcctctcagtgaaaaagaaatcgcagacctgagg
attcagttgaaggggaaggaaaaggttcaagtgaaagagctggaaaatcagttattcaag
caaaacgatgtaataacttcagacaacagacaacacctgactatggacttggatgcacag
tga
DBGET
integrated database retrieval system
