Scomber scombrus (Atlantic mackerel): 133993570
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Entry
133993570 CDS
T10651
Name
(RefSeq) glutamate receptor 1-like
KO
K05197
glutamate receptor 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133993570
04082 Neuroactive ligand signaling
133993570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133993570
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Glutamate (ionotropic)
133993570
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
RCR
Motif
Other DBs
NCBI-GeneID:
133993570
NCBI-ProteinID:
XP_062288545
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Position
14:28250499..28324091
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AA seq
896 aa
AA seq
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MRLQSSPLPSSVLLLLLLLLGLCSGTSFPSNINIGGLFPTGSHEYEVFRFALAQHQDVPK
LVPQVDMVDTGSSFAMTYAFCSQFSKGVYAIMGLYDRRTVNMLMSFCGSLHVCFVTPSFP
VQTNNQFVLQLRPELQEPLMALLERFDWERFVYMYSSDSGEDASLLQMTFICMCIAAQKR
NLKNYHYILTNLGFTDLNVTEFQKLGANVTGLQLVNRSDPAVEKINQDWLDFDSKDLKLA
RRMLRYTGALTYDGVSVMATAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQ
QVRLEGLTGHVQFDERGHRTNYTLTVIELSSTGLRKIGYWNERRGYVSTAIYKPVVEEFH
GLQNRTYVVTTILEAPYMMLKKNHEQYVGNERYEGYCAELAAEIAKHVGFNYRLELVGDG
KYGSREAETKMWNGMVGELVYGKADVAVAPLTITLVREQVIDFTKPFMSLGISIMIKKPT
KSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWKGEEEDDEDEVMPSSGS
RRALPANSSELSHSPGYSQSQNQNQQKEKESPEYTNDFGIFNSLWFSLGAFMQQGCDISP
RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEINYGTLDGG
STKEFFRRSKIAVFEKMWSYMRSADPTVFVKNTPEGVIRVRKSKGKYAYLLESSMNEYIE
QRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLAVLKLNEQGLLDKLKNRWWYDKGEC
GTGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRIESRRMKELIDAAI
LGGGGGAAGGGLGDGGASGLGGENGRVVTHDFPKARPQGLPCMGKAAGLGLSSTGM
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcagagctccccgctcccctcctccgtcctcctcctgctcctcctgctgctc
gggctctgcagcggcacaagtttcccaagtaacatcaacataggaggtcttttcccaacc
ggctcccatgagtacgaggtgtttcgcttcgccctggctcaacaccaggacgtccccaaa
ctggtgccacaggtggacatggtggacacggggagcagcttcgccatgacctacgccttc
tgctcccagttctccaaaggcgtgtacgccatcatgggtctgtacgaccggcggacggtc
aacatgctgatgtctttctgcggctctctgcacgtctgcttcgtcacgccgtccttcccc
gtccagaccaacaaccagtttgtcctgcagctgcggcccgagctgcaagagcccctcatg
gccctgctggagcgcttcgactgggagaggttcgtctacatgtacagctccgactcaggt
gaggacgcatcactcctacaaatgacttttatctgcatgtgtatcgctgctcagaagaga
aacctgaagaattaccattacatcctcaccaacctgggcttcacggacctgaacgtcaca
gagtttcagaagctgggagcgaacgtgacgggactccagctggtgaaccggtccgatcca
gctgtggagaagatcaaccaggactggctcgacttcgacagcaaagacctcaaactggct
cgcaggatgctccggtataccggagctctgacgtacgatggcgtcagcgtcatggcgacg
gcgttccagaacctgcggcggcagcggatcgacatctctcgccgtggcaacgcaggggag
tgtctggccaatcccccggctccctggggacaaggcatcgacatacagagagccctgcaa
caggtgcgtctggaggggctgacgggtcacgtacagtttgacgagcgaggacatcgtacc
aactacacgctgactgtgatcgagctcagttccactggactcaggaagatcggctactgg
aatgagaggagaggctacgtgagcacggccatctacaagccggtggtggaggagtttcac
ggtctgcagaacagaacctacgtagtcacaaccatactggaagctccctacatgatgctg
aagaagaaccacgagcagtatgtcggcaatgagaggtatgaaggttactgtgctgaactg
gctgcggaaatcgccaaacacgtcggcttcaactatcgtctggagctggtgggagacgga
aagtacggatcccgagaagctgaaacaaagatgtggaacggcatggtgggagagctggtg
tacgggaaggccgacgtggccgtcgctccgctcaccatcactctggtacgagagcaagtg
atcgacttcaccaaacccttcatgtctctgggaatctccatcatgatcaagaaacccacc
aagtccaaaccgggagtcttctccttcctcgacccactcgcctacgagatctggatgtgc
atcgtgttcgcctacatcggagtcagtgtggtgcttttcctggtgagtcgcttcagtccg
tacgagtggaagggcgaggaagaggatgacgaagatgaagttatgccctcatctggctct
cggcgagctctgcccgccaactcctccgaactctctcactctccaggttattctcagtct
cagaaccagaaccagcagaaagaaaaggagagtcctgaatacaccaacgactttgggatc
tttaactcgctctggttctcgctcggagccttcatgcagcagggctgtgacatctcgccc
aggtctctgtcaggtcgaatcgtgggaggagtttggtggttcttcaccctcatcatcatc
tcctcctatacagccaacctggcagccttcctcactgtggagaggatggtttcccccatc
gagagcgcagaagacctggccaagcagacggagatcaactacgggactctggacggaggc
tccaccaaagagttcttcaggcggtcaaagatcgcagtttttgagaaaatgtggtcgtac
atgcggagcgccgaccccactgtgtttgtgaagaacaccccggagggcgtgatacgagtc
aggaagtcgaaggggaagtacgcctacctgctggagtcctccatgaacgagtacatcgag
cagaggaagccctgcgacaccatgaaagtcggaggcaacctggactccaaaggctacgga
gtggctacgcccaaaggatcggccctcagaaaccctgttaacttggcagtgttaaaactg
aacgagcagggcctgttggacaaattgaaaaacagatggtggtatgacaagggagagtgc
ggcaccgggggaggggactccaaggacaagacgagcgcactgagcctgagcaacgtggcg
ggagtgttctacatcctgattggtggactgggactcgccatgctggtggctctggtcgag
ttctgctacaagtccaggatcgagtccagaaggatgaaggagctaattgacgccgccata
ctgggcggaggaggtggggcagcggggggcggtctaggagacggaggagcttcggggctc
ggaggcgagaacggccgcgtggtgacccatgacttccccaaagccagacctcagggttta
ccgtgcatgggcaaagctgccggtctgggactgtcctccaccggcatgtga
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