Scomber scombrus (Atlantic mackerel): 133993576
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Entry
133993576 CDS
T10651
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04081
Hormone signaling
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133993576 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
133993576 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
133993576
NCBI-ProteinID:
XP_062288554
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Position
2:23952929..23961694
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AA seq
467 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHTMLPRFRNPLQQNEPHMPQNATFPESFPQA
NTMPFPNSPGNSYPNSPGSGSNVTFPHSPSSSEPSSPFQMPETPPPAYMPPEEQMTQDCP
QPMDTNLMAPTLPLESNNRADVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSVLVDG
FTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSR
NCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctcgctcttctccttcaccagcccggcggtcaaacggctgctgggctgg
aagcagggagacgaagaagagaagtgggcggaaaaggccgtggatgctctggttaagaaa
ctgaaaaagaagaaaggagccatggaggagctggagagggctctcagctgccccggtcag
cccagtaactgtgtgacaatcccccgctcactggacggacggctgcaggtgtcccacagg
aaaggtctgccgcatgttatttattgtcgggtgtggcgctggcccgacctgcagtcccac
catgagctgaaggccctggagtgctgcgagttcccgttcggctccaaacagaaggatgtg
tgtatcaacccctaccactacaaacgtgtggacagtccagtgctgccccctgtgttggta
ccaaggaacagcgagttcaatgccaagcatacaatgttgcctcgcttccgcaatcctcta
caacagaacgagccacacatgccccagaatgccaccttccccgaatcctttcctcaggcc
aacacaatgcctttccctaattcgccaggaaacagctacccgaattcgccaggaagcggc
agcaacgtcaccttccctcattcaccatccagctccgagcccagcagtccattccagatg
ccagagacgccccctcctgcctacatgcccccagaggagcagatgactcaagattgcccc
caaccaatggacaccaacctcatggcaccaaccttgcccctagagagtaacaaccgagca
gatgtgcagcccgtggcctatgaggaacccaagcactggtgctctattgtttactatgag
ctcaacaatcgtgttggagaagcgttccaggcttcctccaccagtgtgctcgttgatggc
ttcacagatccctccaataaccgcaaccgattctgcctcggcctgctctcaaacgtcaac
cgcaactccaccattgagaacacccggcggcacatcggcaaaggtgtccatttgtattac
gttggtggtgaggtgtatgcagaatgtctgagtgacagcagtatcttcgtccagagtcgt
aactgtaactaccaccacggcttccatcccacaactgtgtgtaagattcccagcggctgc
agcctgaagattttcaacaaccaggagttcgctgaactgctggcccagtctgttaaccat
ggctttgaggctgtttatgagctcaccaagatgtgtaccatccgtatgagctttgttaag
ggctggggcgcagagtaccaccgccaggatgtgaccagcacaccctgctggattgagatt
cacctgcatggtcccctgcagtggttggataaggtgctaacccagatgggttccccccac
aaccctatatcctctgtgtcctag
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