KEGG   Scomber scombrus (Atlantic mackerel): 133993688
Entry
133993688         CDS       T10651                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133993688 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssco04121]
    133993688 (cul5b)
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133993688 (cul5b)
Ubiquitin system [BR:ssco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     133993688 (cul5b)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133993688 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 133993688
NCBI-ProteinID: XP_062288682
LinkDB
Position
14:complement(15781701..15799566)
AA seq 795 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPDDKLQIYRDNFEKAYMDSTERFYRTQAPAYLQQNGVQNYMKYADSKLRE
EEKRALRYLETRRDCNSVQALMECCVNALVTSFKETILAECPGMIKRNETESEYGRTAPT
KGSASSELHLMFSLMDKVPSGIEPMLKDLEEHIMSAGLADMVASAETITSDSEKYVEQLL
TLFNRFSRLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADS
VNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYDPIVSSPKDFAEGTLFFVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRINNAQLQTELVEILKNMFLPQKKMIKEQIEWLIDHKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgcttaagaacaaaggctcccttcagtttgaggataaatgggac
ctgatgcgtcccatagtgctgaagctgctacggcaggagtccgtcaccaaacaacaatgg
ttcgacttattctcagacgtccatgctgtatgcctgtgggatgacaaaggtccggcgaag
atccaccaggccctgaaagaggacatcttagattttatcaaacaagcacaagcacgggtg
ttgagtcaccaggatgacacggcgttgctcaaagcttacattgtcgagtggaggaagttc
ttcacacagtgtgacatcttgccgaagcctttctgccagctggagatcactctgatgggc
aaacagggcagcaacaagaagtccaatgtggaagacagcatcgtccgcaagctgatgctg
gacacatggaacgagtccatcttctccaacattaagaacaggctacaagatagtgccatg
aagctcgtccacgctgagaggctcggagaggcctttgattcccagctggtcattggagtg
cgagagtcttacgtgaacttatgctccaaccctgacgacaagctgcagatctacagggac
aactttgagaaggcgtacatggactcaaccgagaggttctacagaacgcaggcgcctgcc
tatctccaacaaaacggagtccaaaattacatgaaatatgctgattcaaagctgagggaa
gaggagaaacgtgcactgcgatacctggagacgagacgtgactgtaactctgtacaagca
ttaatggagtgttgcgtgaatgcactggtaacatcatttaaggagaccatcttagccgag
tgccccggcatgatcaaacgaaatgagacagagagtgagtacggcaggactgctcccacc
aaaggctcagccagctcagagctgcatctcatgttctctctaatggacaaagtgcccagc
ggcatcgagcccatgctgaaggacctggaggagcacatcatgagcgccggcctggctgat
atggtggcatccgcagagacaatcacctcagactctgagaaatacgtggagcagctgctc
accttgtttaaccgcttcagtcgactggtgaaagaagcctttcaggacgatccgcgcttc
ctgacggcgagagacaaagcttataaagctgttgtgaatgatgccactatatttaaatta
gaacttcctttgaaacagaaaggggtgggtttaaaaactcaaccggagtccaagtgtcca
gagctgctggccaactactgcgacatgctcttgaggaagaccccactaagcaagaagctc
acttctgaagagatcgaggccaagctcaaggaagtgctgctggtgctgaagtacgtccag
aacaaagacgtcttcatgcgctaccacaaagcccacctgacccgccgactcatcctggac
atctcagccgacagcgagatcgaggagaacatggtggagtggctcagggaagtaggaatg
ccagctgattatgtcaacaagctggcccggatgtttcaagacatcaaagtgtccgaggac
ctcaaccaatcgttcaaagaaatgcataaacataacaagctcgctttaccagccgactcg
gtcaacataaagatcctgaatgctggagcgtggtcgaggagcagcgagaaagtctttgtg
tctctacctacagagctggaggatttgataccagaggtagaagacttctataagaaaaac
cacagcggcaggaagcttcactggcatcacctaatgtccaacggcattataacctttaag
aatgaggtgggtcaatatgacttggaggtgaccactttccagctggccgtgctgtttgcc
tggaaccagcggcccagggagaggatcagctttgaaaacctcaagttagccacggagctg
cccgacgctgagctgcgacgcactctctggtctctggtggcgtttcccaaactcaagcgg
caggtgttgtcgtacgacccaatagtgtcgtcgcccaaagactttgctgaaggaacacta
ttcttcgtcaaccaggagttttctctcataaaaaactcaaaggtccagaaaagggggaag
attaacctgattggtcggctgcagctcaccacagagcgaatgcgagaggaagaaaacgag
ggcatcgtccagctcaggatactaagaacacaggaggccataatccagatcatgaagatg
aggaagcgcatcaacaacgctcagctgcagacggagctggtggagatcctaaagaacatg
tttttaccacagaagaagatgatcaaagagcagatcgagtggctgatagaccacaagtac
ataaagcgggatgagaccgatataaacaccttcatctacatggcgtag

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