Scomber scombrus (Atlantic mackerel): 133993758
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Entry
133993758 CDS
T10651
Name
(RefSeq) cell adhesion molecule DSCAML1-like isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133993758
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
Other
133993758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
133993758
NCBI-ProteinID:
XP_062288799
LinkDB
All DBs
Position
14:10265428..10315572
Genome browser
AA seq
2127 aa
AA seq
DB search
MHGSLGRRGGDMGGAEAPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQ
IFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGEVYAGQSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWY
RNTEPIVPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCSAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVAVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMEVILQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYR
VVFWSLFPDGGGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISSKVIVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTT
QLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGS
HGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTIT
ECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHR
ANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAK
QQALTLGHSGLGSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDS
LLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagtcttgggaggagaggaggggacatgggcggggctgaggctcctctcatt
tcccctccatgcttagcggggcagcagggctggagagacctccggggagcacagtcgcca
gtccagcacggagacccacctggccaaaaaaccgcgcctcacacttgccaggattgccaa
atattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctctaccaggctgtactttgtgaat
gcctccctgcagagggtaacctactccagctcggtgggggtgtccctgccctgtccagca
ggcggcacccccagtgccatactacgctggtacctggcaaccggcgacgacatctacgac
gtgccccacatccgccatgtgcacgccaatggcaccctgcaactttaccccttctcgccc
tccgcttacaacagctacatccacgacaacgactacttctgcactgctgaaaaccaggcg
ggcaagatccgtagccccaacatccgcatcaaagctgttttcagggagccctacaccgtg
cgggtggcagaccagcgctcgatgcggggcaacgtagctgtgttcaagtgcctcatcccc
gctgccgtgcaggagtacgtcagcgttgtgtcctgggagagagacactgtttccatcgtc
ccaggtaacaggttctcgctgacctccttcggggctctttacatctctgatgttcagaag
gaggatgccctctccacataccggtgcatcaccaagcataagtacagcggcgagacgcgc
caaagcaatggagccaggctctccgtaatggaccccaacgagtcctctcccaccatcctg
gacagtttccaagcaggggaggtgtatgcaggccagagtatcgagctcccctgcacagcg
ggaggttaccccagccctactgtgcgctggctgaaagatggtcgcccactgccctcagat
gcccgctggacacggcgtttgacagggctgaccatcagtgacctgaggcaggaggacagc
ggcagctatgcatgcgaggtcaccaacagttttggctcaaaggaggtgtccgggcagctt
catgtgatagatccgttacgagtgaccttgtcccctaagaatctgaaaactggcatcagc
agcacactgttcttcacctgcactgtggagggctctccagaatacaccatcacctggtac
aggaacacagagcccatcgtccccgaccagcacatctccatccagggacaacacaacgac
acgctgcagatcactgcggcacagaagttccactctggggcctaccagtgcttcgcttcc
cgcaagggccacactgctcaggacttttccattattctgctagaggatggtactcctcgt
atcgtgtcttccttcagcgagcgggtggtgaaccccggcgagcccttctcccttatgtgt
tcggctaaaggagccccgcccccttccatcacctggacgctggacgatgagcctgtggtg
cgagactccacctacaagaccagccagtacaccctgtctgatggcctgaccgtgtcacac
gtcaacgtcagcagcccgctcattcgagatggaggagtgtatcgttgcgtcgcacgcaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccgccccgaatcaga
cccatgcgggacatcaccgcagtagcaggcaggaatacctacataacgtgccgtgtgatt
ggctacccttattactctatcaagtggctgaaggacggcatgcagctgcctgataatcat
cgtcaagttgtgtttgagaatggcaccctgcggctgacggatgtgcagaagggcgcggac
gagggcacctacttgtgtagcgttctgatccagccccaggtgtcaatcaaccagactgtc
catgtcgctgtcaaagtgccaccgctcatccagcccttcgatatcccctctacctcagtg
gggaagctcatgtacatcgcttgtgtggtgtcatctggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatcgtgccaggctccgcctctggcgttgcaatagagacc
aaagagttcatgagctccctgcaaatctccaaggtgacactgaagcacaacggaaactac
acctgcatcgccagcaacgctgccgccactgtcagctgggaaagacagttgattgttact
gtgccaccacgttttgtggtgcagcccaacaaccaggattgtatctatggcaaagctgga
gtcctcaactgctctgtggagggttacccacctccaaaagtcatgtggaaacatgccaaa
ggtgtaggaaaccctcagcagtaccacccagtccctctaactggccgtatccagatcatg
tcaaacggctctctgctcatccgacatgtgcttgaggacgaccgcgggtactacctttgt
caggcctccaacggagtgggctcagacatcagtaagagcatgatcctcaccgtcaaaatt
cctgccatgatcaccagccaccccaacaccaccatggcgaggaagggccagaccaaggag
ctgaactgcacagcgcggggcgaacagccgatcatcatccgctgggagagaggggacacc
gtcatcgacgctgagagaaacccccgttactccatcaccatcaacaagaagggggatgaa
gtcatctctaccctaaagctgaacccagctgagcgaggagattctgtcttcttctcctgc
cacgccatcaactcctatggagagggtcgagggctcatccaacttactgtgcaggaacca
ccagatccccctgagctggaagtgagggaggtgaaggacaggagcatgaaccttcgctgg
atccaaaggtttgatggaaacagtatcatcaccagctatgacatcgaatacaagaacaag
tctgactcctgggatcacatgtacacaaccaggaacatctcgcccaccaacaaccaggcc
aacattgtagagttgcacccggcctgtgtgtatagcatccgcatgtactcctacaacaag
attggccgtagccttcccagcaaagagctcacaatcagcactgaggaagcaccacctgac
gggccaccgatggaagtaatccttcagccgatgacatctcagagcatacgggttacatgg
agggctcctaagaaggaactgcaaaacggggtgatccgaggctaccagatcggttacaga
gaaaacggtccaggcagcaacggccagtacagcatagtggagatgaaagctacaggggac
agtgaagtgtacaccttggataacctaaagaagtttgcccagtacggggttgtggtccag
gcctttaacagagctgggacaggcccatccagtactgagatcaacgctaccacactggaa
gatgtgcccagtgagcctccgcagaacgtgcgagccatctcggtgacgtcggacgaggcg
gtgatcacatgggcagagcctccacggctgacgctgcacggtgtgctgaaaggctaccgg
gttgtgttttggtccctcttccctgacggaggtgggtgctgtgggggccaggcccagtgg
ccaatgcagaagtggggagagatgcagaatatcaccaccacacgtgaacaggtggagctg
cgagggctggagaaattcaccaattacagtgttcaggtgctggcctacacacaagctgga
gatggagtccgcagcaacgtcctgtatatccaaacccgcgaggaccttcctggccctccg
gctggcatcaaggcagtcccctcctctccgagtagtgtggtcgtgtcctggttacctcct
cacaaaccaaatggtgttatccgcaagtacaccatctactgctccagtccagggtctgga
cagccggcgcccagcgagtacgaggccaacccagagatgctcttctaccgtatcacgcac
cttagccgtggtaaacaataccacatctgggctgcagccgtgacaactgccggccgaggc
aacatcagctcaaaggtcatagtggaacctgctgggaaagtcccggctaagatcctgtcc
tttggaggcacagtgaccactccttggatgaaggaagtgcgtctgccctgcagctcagtg
ggagagcccgcccccacgattaaatggaccaaagacagtgaggactctgccattccagtg
acagctgacagtcagcggcagatcttatccaacggcacactggtgctgcgttcagtcaaa
gcagaggattctgggtactacacctgtacagccactaacacccttggctttgacaccatc
atagtcaaccttgtggtacaagttcctcctgaccagccccgtctgactgtctccaccact
tccacctcctccatcaccctggcttggatccccggggacaacggtggaagctccatcaga
ggatttgtgctgcagtactctgtggacaacacagaggaatggagggatgtgttcatcagc
tccagcgaacgttccttcaggttggacaatctgcgctgtggaacctggtacaaggtcaag
ttggctgctaagaacagcgtgggctcagggcgcatcagtgagatcattgaggctaaaaca
catggcagagagccggtgttcaacaaggaccagccgctgctcacccacatcaactccact
catgcgggtctcaacctgcagggctggaccagcggtggctgccccatcactgacatgatg
ttggactttaggcccaaaggtacctgggcctggcagagcctcaaggccaactccaccact
cagctcttcctcagtgagctgcgtgaggccacctggtacgagctcaaaatgaaggcctgc
aacagtgctgggtgtggcaaccagagctcccagtttgccaccactgactatgatggcagt
acaatccctcctattaaatcagctcgtggagaaggggatgatgtgaaaaagctgttctcc
attggctctcctgtcatcctggttactctgggtgtcgctttgcttttcattatccgcaag
aaacgcaaggagaagaggcttaaacgactcagagatgctaagagcctcgctgagatgctt
atcagcaagaacaatcgcagtatagacactcctgtgaagggtcctcctcaaggaccgagg
ctccatatcgacatcccccgggttcagctactcattgaggacaaggaaggcatcaaacag
ataggagaggacaaggcagctgtgccagtgacagacactgagttcagccaatcagtgaat
cctcagaacttctgcacaggcgtgtctcttcaccaccaggcccttatccagaattcaggg
cctttgattgacatgtcagacatccgccctggcacgaatcctgtgtctaggaagagcata
aaatcagctcacagctccaggaacaggtactccagccaatggaccctgagccgtccgagt
cagagccagtcaacagcctcagcacgaactctgacctcagactggcggaccatgggctct
catggcatcacggccaccgagagtgacagctacagtgccagcctctctcaagacacagac
aagggacgcaacagcatggtgtcaacagagagcgcctcgtccacctatgaggagctggca
agggcctacgagcatgccaagctggaggagcacctgcaacacgccaagttcaccattaca
gagtgtttcatctccgacagctcctctgaccaaatgaccacaggtaccaatgaccctgca
gacagcatgacctcgctcagcacgccgtctgaacctggtatctgccgcttcactgcctcg
ccacccaaaccgcaggactatgaccgcggtaaaaatgtggctgttcccattccccaccgt
gctaacaaaagcgaattctgcaacctacccctctacatgaagacagacccattcttccgc
aagcaaggggagctgcatgacccatgtccagctgtgccaccgagggaagcctcaatccgt
agcctgacacaacgggcgtatcacacccagggccgtcacaagactctagaccctgccaag
cagcaggccctgacgctgggccactctgggctgggcagcttgggtgcgagctcgggtact
gccaccttgccccaaaggactctcaccatgcccagctccaacactgcagcaacagcttcc
acttccagcacgagcagcaaccccaccaacagtaacaaggtggggggatccagagactcg
ctgctagagagcagctcctctgcactggggagactgcagaaacagagtgtgggggcctac
tccaagtcatacacactggtatag
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