Scomber scombrus (Atlantic mackerel): 133993784
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Entry
133993784 CDS
T10651
Symbol
bnip1b
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133993784 (bnip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133993784 (bnip1b)
Membrane trafficking [BR:
ssco04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
133993784 (bnip1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF6236
Motif
Other DBs
NCBI-GeneID:
133993784
NCBI-ProteinID:
XP_062288846
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Position
14:25382926..25387241
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AA seq
230 aa
AA seq
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MASSADVHVRICGQEIIKYDLEIKALIQDIRDCPGPQSTLLEFNSQVKDKFNHLRLRIQD
LEQMAKEQDRETDRLTIQAETESQRKQMLSNQTAWRKANLACKLSIDNMEKDELLHGGDT
GSTRQRKVTKESLVETSSNITESLMSISRMMAEQVNQSDDTIGTLVSSSRTVLETNEEFK
NMTGTIHLGRKLILKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgcggatgttcatgtccgtatctgtggacaagaaattataaaatatgac
ctggagattaaggccctcatccaggacatcagagactgccctggacctcagtctactctc
ttggagtttaactctcaggtcaaagataagttcaaccatctcagactcaggatacaggat
ctggagcagatggccaaagagcaggacagagagactgacagactgaccattcaggcagag
acggagagccagcgaaagcaaatgctgagtaaccagacagcttggaggaaagctaacctg
gcctgtaaactgtccatagacaacatggagaaggatgagctgctccatgggggagacacc
gggagcaccagacagaggaaggtgactaaagaaagcctagtagaaaccagcagcaacatc
acggagagtctgatgtctatcagcaggatgatggccgaacaggtgaatcagagcgatgac
accatcggcacactcgttagctcctccaggacagtgctggaaaccaacgaggagtttaaa
aacatgacagggaccatccatctgggaaggaagctgatcctgaagtacaaccggcgggaa
ctgacagacaagctgctgatctttcttgctctggccctcttccttgccaccgtcctctac
atccttaaaaaacgcctcttccccttcatttag
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