Scomber scombrus (Atlantic mackerel): 133993800
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Entry
133993800 CDS
T10651
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a
KO
K06781
cell adhesion molecule 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133993800 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133993800 (cadm1a)
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
Nectin family
133993800 (cadm1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
Motif
Other DBs
NCBI-GeneID:
133993800
NCBI-ProteinID:
XP_062288873
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Position
14:complement(16356581..16750487)
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AA seq
424 aa
AA seq
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MFQAALHKGAAQIPVVSQNLVTDNVSVVEGEMAIISCRVKDNDDSVIQLLNPNRQTIYFR
DMRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPPQEAYADITVLIPPGNP
IIEARDEILSEGNETEMTCTAMSSKPAATIRWMKGDKELPGKPKVELSYDKMYTVTSRLT
FTVSKEDDGVPVLCIVDHPAVKDFQAQKYLEVQYKPEVKIVVEFPQGLTREGENLELTCQ
AKGKPQPQRVKWVKVDDDVPSHAVITGGDLYIENLNKSYNGTYRCVASNSVGESYDDYIL
YVYDAPTTTPIPTTATTTTTTITTTILLVCSDTTPSTEPAAHDSRAGEGAPRTVDHAVIG
GVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHTNSDEKK
EYYI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcggctcttcataaaggagctgcacagatcccagtggtgagtcagaacctg
gtgacagacaatgtgtcggtggtggagggcgagatggcgatcatcagctgtcgggtgaag
gacaatgacgactcggttatccagctgctcaaccccaacagacagacaatatacttcaga
gacatgaggccactaaaagatgctcgcttccagctggtgaacttctcagacaacgagctg
cgggtgtcactgtctaatgtctcgctgtcagacgagggtcgatatgtttgccagctctac
acagaccccccgcaggaagcctacgctgacatcaccgtgctaattcccccaggcaacccc
ataatcgaggcccgggatgagatcctgagtgagggtaacgagacagagatgacctgcact
gctatgagtagtaagcctgccgccaccatcagatggatgaagggagataaggagctacca
ggaaaacccaaagttgagctgtcctacgacaagatgtacacagtaaccagccgactcaca
ttcaccgttagcaaggaggatgatggcgtacctgtgctttgcattgttgaccaccctgca
gtcaaggacttccaagcacagaaatacctggaggtgcaatacaaaccggaagtaaagatc
gtggtagaatttcctcagggtctgacgagggaaggcgagaacctggaactgacgtgtcag
gccaaaggcaaaccccagccacagcgggtgaaatgggtgaaggtagatgacgatgtgccg
tcccacgccgtcatcaccggcggtgatctttacatcgaaaacctcaacaagtcctacaat
ggaacctaccgctgtgtggcatccaactcagtgggggagtcttatgacgactacatcctc
tacgtctatgatgctcccaccactacccctatacccaccacagccaccaccaccaccacc
accatcaccaccaccattctccttgtgtgctcagacaccacgcccagcactgaacctgca
gctcatgattcacgagctggagagggagcgccaagaacggtggaccatgcagtgattgga
ggagtggtagctgtggttgtctttgccatgctctgtctactcatcgttttgggacgctac
tttgcaagacacaaaggtacctacttcacacacgaagccaaaggagcagatgatgcagcg
gacgcagatacagccatcatcaacgcagagggtggccacaccaactcggacgaaaagaaa
gagtactacatctaa
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