Scomber scombrus (Atlantic mackerel): 133993867
Help
Entry
133993867 CDS
T10651
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133993867 (zc3h12b)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
133993867 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
133993867
NCBI-ProteinID:
XP_062288954
LinkDB
All DBs
Position
14:9774043..9789524
Genome browser
AA seq
837 aa
AA seq
DB search
MVEKLKMEKRPCREENIDSSEAQHATDESEDGSSSESESEEQQHLKVQANSSSCKRREPL
AATKPHRQLCRSPCLDRPSFSQSSTVQDFREEDAGAGAGLKHASDREYQTKMEFALKLGY
SGEQVQTVLNKLGAAALINDVLAELVRLGNKVEPESQPSSSTATSVSRSPCVKETASPEV
SLEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVFVPAW
RKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVS
NDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHK
KQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVKCGIGPA
TVKGDNSEAKRVAPKRQSDPSIRCEPPETLSIVRKSETNSVPSLVSALSVPTMQPAKSHA
AGALNTRSASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASVTYSEQFPKYDSVSDH
GYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSDSFSSYGDLY
PSSVDSSLEETMKGQQQSSAQARMQAFSHGFRHEALTRVQSYGPEEPKQGPRKQSGAHLA
PHIQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSNPMRQRRP
PLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWNSPWETPSA
AEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTKLRSCH
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaagctcaaaatggaaaaacgcccatgcagggaagagaacattgactcaagt
gaggcccagcacgccactgatgagtctgaggatggaagcagctcagaaagcgaatccgag
gagcaacaacacctgaaggttcaggcgaacagcagcagctgtaagaggagggagcccttg
gctgctacaaaaccccaccgccaactctgtcgttctccgtgcctggaccggccaagtttt
tcccaaagtagcaccgtgcaagattttcgtgaggaagacgccggtgcaggagcggggctc
aagcatgccagcgacagggagtaccagacaaagatggagtttgctttgaagctgggctat
tcaggagagcaggtgcagacagtgctcaacaagttgggagctgccgctcttattaacgat
gtgctcgctgagttagtaaggcttggaaataaagtagagcctgaaagtcaaccttccagc
agtacggccacatcagtgtcacgctccccctgtgttaaagagacagcgagtccagaggtg
tcattggaagaggagtctgtggatacatatgataacctcaggcctatcgtcatcgatggt
tcaaatgtggcaatgagccatggaaacaaagaggtgttctcatgccgtggtatccagctt
gctgttgaatggttcctagagaaaggacataaagacatcactgtgtttgtcccagcctgg
aggaaggagcagtcaaggcctgatgccctcattacagatcaagaaatattacgcaagctg
gaaaaagagaagatcctggttttcaccccgtctcggagggttcaaggccgaagagtggtg
tgctatgatgatcgcttcatagtgaagctggcttatgattctgatggaattattgtgtca
aatgacaactatagggacttgcaaaacgagaagccagagtggaagaagttcatagaggag
cgtctcctaatgtactcatttgtcaatgacaagtttatgccacctgatgatccactggga
agacatggtccaagcttagaaaatttccttcgtaagcgtcctgttgttccagagcacaaa
aaacaaccctgcccctatgggaaaaagtgcacatatggacacaagtgcaagtactaccat
ccagagcgcgtcaaccagccgcagcggtcagtggctgatgaactgcgggcctttgccaaa
ttgtctgcagtgaagacaatgagtgagggggctttagtgaaatgcggtattggtccagcg
actgtaaaaggggacaactctgaggccaaacgtgtggcacccaaacgtcagtctgacccc
agtattcgttgtgaacctccagaaacgctgtccattgttaggaagtctgagacaaattca
gtgccttcccttgtgtctgctctcagtgtgcccaccatgcagcccgccaagagccatgca
gctggggccttgaatacccgatcagccagcagcccagtgccaggttctttgcagttctca
cacagttctctggagcacatgtctagtgtacagtacccgcccattttggttactaatagt
catggcgcctctgttacatacagtgaacagttcccaaagtatgattcagttagtgaccat
gggtattactcactgcacagtgatttttcaaacatgagcatgagcagcatgcataacgtc
gacagtttctgtagcatggagcacgagcatggtgtgtatcagagaaatcccagccactgc
cctgaatcctgcctcagccattcaaacagcgactcgttctcctcctacggggacctgtac
ccaagctctgtggacagtagcttagaggagaccatgaaggggcagcagcagtcttctgct
caggctaggatgcaagctttctcccatgggtttcggcatgaagcgctgactagggtacag
agttatggaccagaggagcccaagcagggcccccgtaagcagtctggagctcacctcgca
ccacatatccagcatgctgcagtgggggccaggtccagctgccctggagactatcccctc
actcagaatgtcctcccacctctgtcctcccagcccactcggtctcttggcatgactcgc
atggacagcatatcagattcacggctatatgatagcaacccaatgagacagaggcgacct
ccactgtgccgcgagcagcacgcaagctgggaccctctgccttgtggtaatgagtcctac
ggatatcactcatatccactgagtaacagcttgatgccctgttgcgagcgggtgatggtc
cgcagcatgccagacaaaatggaacaaatttggaactcgccgtgggagaccccatctgca
gctgaacaccaagagcggtatgtcatcccagaccaccagtatcaaacatatcggaacctt
tgtaacatctttcctgcttacgtagtccactcagtgatggagaagaaccctcatttgaca
gacccccaacaactcgccgccgtcattgttacaaaactgaggtcgtgccattga
DBGET
integrated database retrieval system
