Scomber scombrus (Atlantic mackerel): 133993869
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Entry
133993869 CDS
T10651
Symbol
srrt
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133993869 (srrt)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
133993869 (srrt)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
133993869
NCBI-ProteinID:
XP_062288958
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Position
14:10725041..10733352
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AA seq
909 aa
AA seq
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MGDSDDEYDRRRRDKFRRERSDYDRSREREDRRRDDWNDREWDRGRERRSRGEYRDYDRG
RRERFTPPRHDMSPQQKRMRRDWDDHGGEPYRGGYDLGYGGGGGPSYGPPQHWGHPELHL
MQPHHGIPIQARLGNIHDMDLGPPPPIMKSFKEFLLSLDDSVDETEAVKRYNEYKIDFRR
QQMQDFFLAHKDEEWFRSKYHPDEASRLKAEAHGALRNRVNVFVFLMENSWFDNVSLDIE
QTPAIIKVLDAAVIKMEGGTDHDLRILDLPSEEEEDREKAASVSGGAEPPKREELKTLDA
DRKPSEEKDKTEKDESDSASTERAAARAEEGEDVKEEAEKEATKEEMPEPKKPRRKRKRS
GDSDDEASASESDSDSDSDSNSNCSDKPVKKEEVEDKDEEEEEGEEVKPKENTEEEKKEE
KKPKDDSPRPRPLHRTCSLFMRSIAPTISKAEIIALCRRYSGFLRVCLSDPHPERRFFRR
CWVTFDRSVNIKEVCWNLQNIRLRDCELAPGVNRDLARRVRNVNGITQHKQVLRNDIKLA
AKLIHALDDKGDLWSLKSQDEGQSTELPAQNPILKNITDYLIEEVSAEEEELLGSASGMD
SEEGTKEGNPTEMTVERDDKLAKVLDRLILYLRVVHSIDYYNTCEYPSEDEMPNRCGMIH
VRGPIPPNRITHGEVQQWQKMMEEKLCPLFSLKEVLSEDEALKMGRKDPEEEVEKFVSAN
TQELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIEEVKKEVVFFNNFMMDAKRPSLPE
MKIPPLPGPGQGLLSPSMPFPPQGPQVPMGFGQPRPPLMGYGGMFSDFTCFCHVGWQPLF
FVLILKSFVAGAPPYPPNQQYGGGRGNYDNFRGQGGYLGKPRNIRMSRGDPRNIIEYRDL
DAPDDMDFF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtgatgatgagtatgatcgaaggagaagggacaaattcagacgggagaga
agtgactatgataggtccagagagagagaagacagacgcagagatgactggaacgacaga
gagtgggacaggggcagagaacggcgtagccgcggagaataccgggattatgacagaggt
cgtagggagagattcaccccgcccagacatgatatgagtccccagcagaaacgtatgagg
agagactgggatgaccatggtggagaaccttaccgtggtggatacgacttgggttatgga
ggtggaggaggacccagctatggcccaccacagcactggggccaccctgagctgcacctc
atgcagccacatcatggcatccccattcaggcgaggcttggtaacatacatgacatggat
ttgggtcctccccctccgataatgaagagctttaaagagttcctgctgtccctggatgat
tctgtggatgagactgaagcagtcaaacgctacaatgagtacaaaatcgacttccgccga
cagcagatgcaggatttctttttggctcataaggatgaagagtggttcaggtccaagtac
cacccagatgaggccagccgacttaaggcagaggcccacggtgccctgcgcaaccgtgtg
aatgtctttgtgttcctgatggagaatagctggtttgataatgtctccttggacattgaa
caaacaccagccatcatcaaggttctggatgccgctgtgataaaaatggaaggtgggaca
gatcatgatcttcgcatcttggacttgccgtctgaagaagaagaggacagggaaaaggcg
gcgtctgtttcagggggagctgaacctcctaagagagaagagctcaaaacgttggatgcc
gaccgcaaaccctcagaggagaaagacaagaccgagaaggacgagagcgattctgccagc
acagagagagctgcggccagagcagaagaaggggaggatgttaaagaggaggcagagaaa
gaagctacaaaagaagaaatgcccgaacccaagaagccaagaagaaagagaaagcgcagc
ggggatagtgatgatgaagccagtgcctcagagagtgattcagactcagattcagactcc
aactccaactgctctgacaaacccgtgaagaaagaagaagtggaagacaaggatgaggaa
gaagaggagggtgaagaggtgaaacctaaggagaacactgaggaggagaagaaagaagaa
aagaagcccaaagatgactctcccagacctcggcccctccacaggacctgctctctgttc
atgaggagcattgctccaactatttccaaggctgagattatcgcactgtgtcgtagatac
tctggctttctacgtgtttgcttgtccgaccctcatccagagcgcaggttcttcagacgt
tgctgggtgacgtttgaccgcagcgtcaacatcaaagaggtctgctggaatctgcaaaac
attagactgcgagactgtgagctggcaccaggggtgaacagggacctggcgcggagggtg
cgtaatgttaatggcatcactcagcacaagcaggtgctccgcaatgacatcaagctggct
gccaaactcatccatgccttggacgataaaggagacctgtggagcttgaagtctcaggac
gagggtcagagcacagagctgccagcccagaaccccatcttgaagaatatcactgattac
ctgatagaggaggtgagtgctgaggaggaggagctcctgggctctgcaagcgggatggat
tctgaagagggcaccaaggaaggaaaccctacagagatgactgtggagagggacgacaag
ctagccaaggttttggaccggctgatcttgtacctgcgtgttgtgcattcaattgattac
tacaacacctgtgaataccccagtgaggatgaaatgcccaatcgctgtggcatgatccat
gtacgtggacccatcccccccaaccgcatcacacatggagaagtgcaacaatggcagaag
atgatggaggagaagctgtgtcctttgtttagtttaaaagaagtactgtctgaggatgag
gcattgaagatgggccgcaaggaccctgaggaggaggtggaaaagtttgtgtctgcaaac
actcaagaacttggaaaggacaaatggctctgtccgcttagtggcaagaagtttaagggg
ccagagtttgtacggaagcacatcctcaacaaacacggggacaaaattgaagaagtaaaa
aaggaggtggtgttctttaacaatttcatgatggatgccaagagaccgtctctgccagag
atgaaaattcctcctcttccaggcccaggtcaaggcttgctttctcccagcatgccattt
cctccccagggtcctcaggttccaatgggttttggacagcctcgccccccactgatgggc
tacggtggtatgttctctgactttacttgtttttgtcatgttggatggcaacctctattt
tttgttctgattttaaaatcctttgttgcaggagcacctccctatccccccaatcagcag
tacggaggaggcagaggcaactacgacaacttccgcggacaaggtggctaccttgggaag
ccacgcaacattagaatgtcacgaggtgatccacgcaacatcattgaatatcgcgacctt
gacgcacctgatgatatggacttcttttag
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