Scomber scombrus (Atlantic mackerel): 133993893
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Entry
133993893 CDS
T10651
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133993893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133993893
04090 CD molecules [BR:
ssco04090
]
133993893
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
Nectin family
133993893
CD molecules [BR:
ssco04090
]
Proteins
133993893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ig
Ig_3
I-set
V-set
C2-set_2
C2-set_3
Ig_2
V-set_CD47
TMEM154
Orf78
Motif
Other DBs
NCBI-GeneID:
133993893
NCBI-ProteinID:
XP_062289002
LinkDB
All DBs
Position
14:1817731..1824184
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AA seq
463 aa
AA seq
DB search
MELKLQLVVFVLFIQGSLAVWQRMTVIKGQTLHLNCPIRNAHKNTVEWKNPEGEIMFFNL
IEGEALRDKRYSIDKLSQTEFSISVSDVTFRDGGNYTCFEYDHQTIEKKVEVTVFGSPKM
SKSNHDGKVIIKCTAEESCKFPQIYWQIDNGPEIHAHHPQTVHEGKKYVTIDMLHVVSSK
NRATVKCIVRHPALSSPLKNYVKIGPKKPTTMTSPPTPHSQGSITTTRWISHGGTTAYLT
TRDEHGPSSESSATLSTIPSNETVTEPTHVTSTGEVSRTSVFSNTTKTGNESSSNATSTT
GWTYETTEETPFYNDTEGNKTVGSNDREKQTANKGNSSLLVFLVTCLIFALLIVVIFFGI
KLRRAHITWKRVFIVTENEDSVPSEDSNKSKSSHEEKNSQGQRWRGLSNRAFTQYVSEEP
KGITSVINTGAMTAAERTNIGQTFQPQTQAQTPTISNIKETEL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagctgcagctcgtcgtcttcgtgttattcatacagggttcacttgcggtg
tggcagcgtatgactgtgataaaaggtcagacactccacttaaactgccccattagaaac
gctcacaagaacactgtggaatggaagaaccctgaaggagagataatgtttttcaacctg
attgaaggtgaagctttgagggacaagcggtacagcatcgacaaactttcccagactgaa
ttcagcatcagtgtttccgatgtcaccttcagagatggaggcaactacacatgctttgag
tacgaccaccaaacaatagagaagaaagtagaggtgacagtgtttgggtcccccaaaatg
tcaaaatcaaatcatgatgggaaagttatcataaaatgcactgctgaagagagctgcaaa
tttccccagatctactggcaaatagataacgggcctgaaattcatgctcatcatccccaa
actgtacatgaaggtaaaaagtatgtcaccatagatatgttacatgtcgtgtcttcgaag
aacagagccaccgtgaaatgcattgttcggcatccagctctgtcctcacctctgaagaac
tatgtcaaaattggaccaaaaaagcccacgaccatgacaagtccacccacacctcactct
caagggtcaattacaacgacccgctggatctcacatgggggaacaacagcatatctcaca
accagagatgagcatgggccttcatcagagagttctgcaacgttatcaactattccttcc
aatgagacagttacagaacccacacatgtcaccagtactggtgaggtctcaagaacttct
gtattttctaacacaacaaagactggaaatgaaagtagcagtaatgcaacaagcacaaca
ggttggacatatgagacaacagaggagaccccattctataatgatacagagggaaataaa
acagtgggctctaacgaccgagagaagcagacagctaataaaggaaactcctcattactg
gtcttcctggtgacatgcctgatcttcgctctgctgattgtggtcattttttttggcatc
aagttaagaagagcacacatcacctggaagagagtgtttattgttacagagaatgaagac
tctgttccttcagaggacagcaacaaatcaaaatcaagccacgaagagaagaactcccaa
ggacagaggtggagaggactctccaacagggcattcacacagtacgtctctgaagagcca
aaagggataacttcagtgataaatacaggagcgatgacggcagcagagaggacaaatata
gggcaaacttttcagcctcaaacccaggcacaaactccaaccataagtaacatcaaggag
acagaactgtag
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