Scomber scombrus (Atlantic mackerel): 133993952
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Entry
133993952 CDS
T10651
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133993952 (nle1)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133993952 (nle1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
DSE1_N
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
CFAP251_N
NBCH_WD40
NLE
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_DCAF12
eIF2A
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
TRM82_WD
Tricorn_2nd
WD40_RFWD3
PAC11
Beta-prop_Nup120_160
Beta-prop_HPS5
RMC1_N
PD40
Beta-prop_SPT8
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
WDR54
Cytochrom_D1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
133993952
NCBI-ProteinID:
XP_062289079
LinkDB
All DBs
Position
14:complement(13351588..13356592)
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AA seq
477 aa
AA seq
DB search
MSEDVERLLIQFQDEQGEVLGSPFDVPLDITPEKLQLVCNALLQKEEPVPLAFFVRGEAE
VVSCLGTCVKALGVETEQVLPVVYQPQAVFRVRAVARCTSTLQGHTEAVISTSFSPTGKY
LASGSGDTTVRFWDLATETPHHTARGHTHWVLSIAWSPDGKKLASGCKNSQICLWDPVTG
TQIGKTLTGHTKWITWLCWEPLHLNAGCRHLASSSKDGSIRIWDTVLGRCEKILTGHTHS
VTCVKWGGDGLLYTSSQDRTVKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEP
ATATVNPQDLTGSLEELKEKALQRYNTVRGSAPERLVSGSDDFTLFLWKPAEDKKPLARM
TGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLMSLRGHVASVYQVAWSADSRL
LVSGSSDSTLKVWDIKTGKLNMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagacgtggagcggctcctgattcagttccaggacgagcagggggaagttctg
ggttcaccttttgatgtgcctcttgacatcaccccagaaaaacttcagctggtctgcaat
gcactgctgcagaaggaggaaccagtgccactggcgttttttgtgcgtggagaggcagag
gtggtgtcctgtctgggaacttgtgtgaaggctcttggggttgaaacagagcaagtcctg
ccagtggtgtaccagccacaggccgtgttcagggtccgggctgtggctcgctgtaccagc
acattacagggacacacagaagctgtcatctcaacttcattcagtcctaccggcaaatat
ttagccagtggttcaggtgataccacagtacgtttttgggacctggcgactgagacgcct
caccacactgccagaggacacacacattgggtactgagcatcgcctggtcacctgatggc
aagaagctggcttcgggatgcaaaaacagtcagatctgtctgtgggatccagtgacaggc
acacagatagggaagactttgacaggacacactaagtggatcacttggctctgctgggaa
cctctgcatctcaacgcagggtgtcggcacttagccagcagctcaaaagatggctcaata
cgaatttgggacaccgtgttgggacgttgtgagaagatcctgactggacacactcattct
gtcacctgtgtgaagtggggaggagatggacttctctatacttcttctcaggacaggaca
gtcaaagtttggagagccaaagatggtgtccaatgcaggactctgcagggtcacgcccac
tgggtgaacaccctggctctcagcacagactacgtcctgcgtactggagcttttgaacct
gcaactgccaccgtcaacccccaggacctcactggatcattggaagagctgaaggagaaa
gctttgcagagatataatacagttaggggttcagccccggagcgcctggtgtctggctca
gatgacttcaccttgttcttatggaaacctgcagaagacaagaagcctttggcaaggatg
acaggccacagcgccctggtcaatgaagtgctcttctccccagacaccaggctcctcgcc
tctgcctcattcgacaagtccattaaaatctgggatggacgcactggaaagtacttaatg
tccctacgtggccatgtggcatctgtgtatcaagtggcatggtcagcagacagccggctg
ctcgtcagtggcagcagtgacagcacactgaaagtctgggacatcaagactggaaagctt
aatatggatctacctggccatgctgatgaggtttatgcagtggactggagtcctgatgga
caaagagtagctagtggtgggaaagacaaatgtcttagaatatggagacgatag
DBGET
integrated database retrieval system
