Entry |
|
Symbol |
pknox2
|
Name |
(RefSeq) homeobox protein PKNOX2
|
KO |
|
Organism |
ssco Scomber scombrus (Atlantic mackerel)
|
Brite |
KEGG Orthology (KO) [BR:ssco00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:ssco03000]
133993955 (pknox2)
Transcription factors [BR:ssco03000]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133993955 (pknox2)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
14:complement(2959491..3036098)
|
AA seq |
490 aa
MMQHVSPAPAVTMMATTQSVPPPSYQESQQMTGTTQQNTKTPQVHIPAASAAGNTSVSVT
LDPQAQLESDKRAVYSHFQRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQ
EREHKPFFSEDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLL
RNDLGGPYSPTHTGLSMQQELIQTSSPSMTSISSSVNPSGIVVPAGGLQQGNVAMTTINS
QVVSGGTLYQPVAMVTSQGQVLTQALPPGTIQIQNSQLNVDLSSLLDSEDKKSKNKRGVL
PKQATNIMRSWLFQHLMHPYPTEDEKRQIAGQTNLTLLQVNNWFINARRRILQPMLDASN
PDPAPKAKKMKSQHRPTQRFWPDSIVAGVLQTHRSQTGNNSDNPLSMDSLQSLSSDSATL
AMQQAMLGADDSMDGTEEEDEEEEEEEEEEGMEEEEEEDGEEENDRGRQMSGGGGGGRRD
LSMEHREELE |
NT seq |
1473 nt +upstreamnt +downstreamnt
atgatgcaacatgtgtccccagcacctgcagtgacaatgatggccaccacccagagcgtt
cctccaccatcgtaccaggagagccaacagatgacgggcaccactcagcagaacaccaag
accccacaggtccatatcccagcagcctctgcagcaggaaatacctctgtcagtgtgacc
cttgacccccaggcccagcttgagtctgacaagagggctgtttacagtcattttcaaaga
catccgttgttccctctgcttgcgttgttgtttgagaaatgtgagcaggccacacaggga
tccgaatgcatcacttcggccagctttgatgtggacatcgaaaactttgtgcaccagcag
gaacgagagcacaagcccttcttcagtgaagatccggagctggacaacttgatggtaaag
gcaattcaggtgttgcggatccacctactggagttagagaaagtcaatgagctctgtaag
gatttctgcaaccgctacatcacctgcctcaagaccaagatgcacagcgacaacctcctc
cgtaacgacctcggaggaccatattctccaacacacaccggtctcagcatgcagcaggaa
ctaattcagacctcctctccatccatgacctctatctccagctctgttaacccttcaggg
attgtggtgcccgccgggggtctgcaacagggcaatgtcgccatgactaccatcaactct
caagtggtatcaggtgggaccctgtaccagccggttgccatggtgacatcgcaagggcaa
gtgttaacgcaggcgctgccgccgggaaccatacagatccagaactcacagcttaatgtg
gacctgtcgtccctgttggacagtgaagacaagaagtccaagaataagaggggggtcctg
cccaaacaagccaccaacatcatgcgctcctggctctttcagcatctcatgcacccgtac
ccaacagaagatgagaaaaggcagattgcaggacaaacaaatctcacccttttgcaagtc
aacaactggttcatcaatgctcgccggcgtatcctccagcctatgctggatgccagtaac
cctgacccagctcccaaagcaaagaagatgaagtcccagcaccgtcccacacagcgcttc
tggcccgactccattgtagctggagtcctgcagacgcacagatctcaaacaggaaacaac
tcagacaacccgctgagcatggacagcctccagtctctgtcgtcagactcggccaccctg
gccatgcagcaggccatgctgggagcggacgactccatggacggcaccgaagaggaggac
gaagaggaggaggaggaggaagaagaggagggaatggaggaggaggaagaggaggacgga
gaggaggaaaacgacagggggaggcagatgtccggaggaggaggaggaggaaggagagat
ctgagcatggagcacagagaggaactggagtag |