Scomber scombrus (Atlantic mackerel): 133993966
Help
Entry
133993966 CDS
T10651
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133993966 (khsrp)
03041 Spliceosome [BR:
ssco03041
]
133993966 (khsrp)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133993966 (khsrp)
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133993966 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_PNO1_2nd
KH_Vigilin
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
133993966
NCBI-ProteinID:
XP_062289102
LinkDB
All DBs
Position
2:10371720..10379700
Genome browser
AA seq
680 aa
AA seq
DB search
MSEYGALPTNGVGAGMKKDAFADAVERARQIAAKIGGDGVPIVSNNGGAENYPFASQKRS
LEEADEPDAKKLASQSERDSGLSIEAQLAALSQQSVRPSTMTEEYRVPDGMVGLIIGRGG
EQINKIQQDSGCKVQIAHDSAGLPDRSVSLTGSPDAIERAKALIDDIVSRGHESTNGQSG
SMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQ
QAKEMVNEILRERDHAGFGDRGDYGPRMGGGGGGGGNGGGGNGNGNGGGGGGIDIAVPRH
SVGVVIGRSGEMIKKIQSDAGVKIQFKQDDGTGPDKIAHIMGPPDQCQHAASIITDLLQS
IRAREEGGQGGPPGPPGAGMPPGGRGRGRGQGNWGPPGGEMTFSIPAHKCGLVIGRGGEN
VKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEEKIEGPLCPVGGSP
GPGGPGGPMGPYNPNPYNAGPPGGAPHGAAPGGPQFCPQGWGNTYQQWQAPGQHDPSKAA
AAADPNAAWAAYYAQYYGQQPGGAMAAQNPGAPAAAAPGDQSQAAQASGGQPDYTKAWEE
YYKKMGMNQPAGGAAAAPGAAAAQAAAAQAAAAGGGSAAGGQQDYSAAWAEYYRQQAAYY
GQGGQAPGQAAAPQQGQQAQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatacggcgctctgccgactaacggagtcggcgctgggatgaaaaaagacgct
tttgcagacgcagtagaacgagccagacagatcgcagctaaaatcggtggtgacggagtt
cccatagtgagcaacaacggaggagctgagaactatccattcgcctcacagaaacgatcc
ctggaagaagcagatgaaccagatgccaagaagcttgcatcacagagtgaaagagattct
ggattgtctattgaagctcagcttgctgccctgtcccaacaaagtgtcaggccctccaca
atgacagaggagtacagagtgcccgatggcatggtcggtctgatcatcggccgaggaggt
gaacaaattaacaaaatacaacaggattctggctgcaaggtccagattgcgcatgacagc
gccggtcttccagatagaagtgtttctctgacagggtcaccagacgccatagagagagcc
aaggcactcatagatgacatcgtgtcgaggggtcatgagtcgaccaacgggcagtcgggt
tccatgcaggagatgatcatccctgcgggcaaggccggtcttattataggcaaaggagga
gagaccatcaaacagctgcaggagcgcgctggagtcaaaatgattcttattcaagatgga
tcccagccacccaacatagataaaccgctccgcatcattggagacccctacaaagtgcag
caagcaaaggagatggtcaacgagattctacgagaaagggatcatgctggttttggagat
aggggtgattatggaccgaggatgggtggcggaggaggtggtggtggcaacggcggtggt
ggcaacggcaacggcaatggtggtggtggcggcggcattgatatagctgtgccccgccac
tctgtgggagtcgtgattggccgaagcggggagatgatcaagaagatccagagcgatgct
ggagtgaagatacagtttaaacaagatgatggtacaggtcctgataaaattgcccatatt
atgggtccaccagaccagtgtcagcacgctgcctcaatcatcactgacctactacagagt
atccgcgcccgagaggagggtggacaggggggcccccctggaccccctggtgcagggatg
ccacctggtggacgaggacggggcagaggccaggggaactggggtcctccaggaggagaa
atgaccttctccattcctgctcacaaatgtgggcttgtaatcggcagaggaggggagaac
gtcaagtccattaaccaacagaccggcgcgtttgtggagatatcccgccagcccccgcca
aacggagaccccaacttcaaactgttcaccatccgagggtcaccgcaacagattgaccac
gcaaagcagcttatagaagagaagattgagggtccattgtgtcccgtgggtggtagtcct
ggtccaggaggccccggtggtcctatgggtccctataatcccaatccttataatgcaggg
cctcctggtggtgctccccatggagctgcacctggtggtccccaattctgtcctcagggt
tgggggaacacctaccaacagtggcaagccccaggacaacatgaccccagtaaggcagca
gcagccgctgacccaaacgcagcatgggcagcctactatgcacaatactacggccagcag
ccagggggcgccatggcggcccagaatccaggagctcctgcagcagcagcaccaggagac
cagagccaagcagcgcaggcttctgggggccagccggactacacaaaggcttgggaggaa
tactacaagaagatgggcatgaaccagcctgctggaggggcagcagctgctccaggtgca
gccgcagcacaagcagcagcagcacaagcagcagcagcaggtggaggatctgcagccgga
ggccaacaggattacagcgcagcctgggctgagtactacagacagcaggctgcctattat
ggacagggagggcaggcgcctggacaggcagctgctccacagcagggacaacaggcccag
taa
DBGET
integrated database retrieval system
