Scomber scombrus (Atlantic mackerel): 133994002
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Entry
133994002 CDS
T10651
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00562
Inositol phosphate metabolism
ssco01100
Metabolic pathways
ssco04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
133994002 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
133994002 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133994002 (synj1)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
133994002 (synj1)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
133994002 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
133994002
NCBI-ProteinID:
XP_062289146
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All DBs
Position
14:complement(14503616..14529336)
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AA seq
1633 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRTKDECLMFESGAVAVLSAAEKEAIKNTYSKIVDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPGDEDRISEVR
KVLNSGHFYFAWSATGISMDLSLNAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACTFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DRVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFAALRSLYGKQVIIN
LLGSKEGEHMLSKAFQSHLKASEHAAAVKMVNFDYHQNVKGGKADKLHSILKPHVSKFLE
DCGFFYYSGETGIARTQGGTIRTNCLDCLDRTNSVQAFFALEMLPKQLEEMGLTEKPQLV
ARFQEVFRTMWSVNGDSVSKIYAGTGALDGKAKAGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYASPRVLLGMCQNFHKYTRPKQIRVCVGTWNVN
GGKQFRSIAFRNQTLNDWLLDAPKKAGHPEFQDSKANPIDIFAIGFEEMVELNAGNIVSA
STTNQKLWAAELQKNLSRDHKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMG
GATGNKGGVAIRLLFHTTSICFVCSHFAAGQSQVKERNDDYNEITRRLTFPMGRLLYSHD
YVFWCGDFNYRISLPNEEVKELIKQQNWDALTAGDQLFDQKNAGLVFRGFIEGKLDFAPT
YKYDLFSEDYDTSEKCRTPAWTDRILWKRRKWNFEQTAEEMNVVGAASTSGESEDDPDNP
WSPGTLKYYGRAELKTSDHRPVVAVMDVDILEVDPEARHQVYKDVIALQGPPDGTILVSL
CSSGPDDYFDDALIDELLDKFSHFGEVILIRFVEEKMWVTFLEGYSALAALSLSASTVLG
KVIDIRLKSPGWIKSLEEEMSVDRICGSIPTSASSTLLAEDTDMGDDDYDMEGDVDEEVE
EILPQHLQPGAGSGPGSSPLPSPRSSPCPSPTHGEPTAPSRPSRSAQPSRPSQGPPFDFQ
PGAPTSLALEPKRPPPPRPNAPPARPAPPQRPPPPSGRGQAGAPGAGGVPRPNIPPRAGV
ISIPPQSRQLPPSHPGAPRPIQEVHPGAPRPIPDTHPGAPRPVTKPTDLPLGPPPSGPPA
AVRPQVPSPMQPPTQPQQAAPSVQSQLPAPMQPTLPAPIYPQQAPPASTAAAAPAGPPQG
LASPKPPPRSRSSHALPPDAAKSETAAPATQTNGLNGIQGEAQWKPDPFDTLTSDFLYST
SSPWHTTQSLTRGSSLRTPPSVLPSSSNTLPSSFSLQTSVRSDLQGLDSTSSSSSLSTPS
PFASCLLPPPPVPSRSRSQETLRASPSPFPIDPLPARPSSTNPFTGPVVQQQHQQRRSVT
PDFSIQGPALKPNLQGTVSALTQPLIPTHAPTSAPAAAPTAQLPRTMSLFGPSSTLNPAP
APLLPLIPDQAPVPTLPLALPSSIPPALAPRRQPPPTGGKPTKQWVTFDDASDFPPPTKT
LQAPIFSSSSLVSQTQTQPSRSGFDSEPDWLSSAPSVFPTLPPPIPTRTATSNPKLPEGP
SDGCFFPRESTER
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcaaaggttatcgcatttaccacaagttggacccacccccctacagtgtc
atagtggagacaaggaccaaggatgaatgcctcatgttcgagtcgggggctgtcgcagtc
ctgtcggcagcagagaaagaggccatcaaaaacacatacagcaagatcgttgatgcctat
ggaatcctgggcgtcctccgcctaaacctgggtgattccatgctccacagtcttgtagtt
gtgacaggatgcagctctgtggggaaggtgcaggactctgaggttttcagggtcacacag
acagattttatatcactaaagaatgatccgggagatgaagaccggatttctgaggtgcga
aaggtcctgaactcgggacacttctacttcgcgtggtctgccactggaatcagcatggat
ctgagcctcaacgcacatcgcaggatcttagaagacactacagataaccgcttcttttgg
aaccaatctcttcacctgcacctgaaacactatggtgtgaactgtgatgactggctattg
aggctgatgtgtggaggtgtggagatcaggaccatttatgcaggacacaaacaggccaag
gcctgcaccttttcccgcctcagctctgagcgagctggcacacgattcaacgtccgggga
acaaatgatgatggacaggtggccaactttgtggagactgaacaggttattttcctggat
gacagagtatcatccttcatacagatccgtgggtcaattcctcttttctgggaacagcca
ggaatccaggttggctctcatcgtgtcaaactctcaaggggatttgaggcgaatgcgcca
gcgtttgaaagacacttcgctgctctgcggagtttgtacggcaaacaagtgatcatcaac
ctgcttgggagtaaggaaggggaacacatgctcagcaaagcctttcagagtcacttgaag
gcatctgagcatgcagcagcagtgaaaatggttaacttcgactaccatcaaaatgtgaag
ggggggaaagcagacaaactccacagtatccttaaaccccacgtcagcaaattcttagaa
gattgcgggttcttctactactcaggagagacaggcattgcaaggactcagggcgggacc
atcagaaccaactgcctggactgtttggacaggaccaacagtgtccaggctttctttgcc
cttgagatgctgccaaagcagctggaggaaatgggtctgacagagaaaccgcagctggtg
gccagattccaggaggtttttaggaccatgtggtctgtcaacggagactccgtcagtaag
atctacgccggcaccggcgccctggacgggaaggcaaaggcggggaagttaaaagatgga
gctcgttctgtgacaaggaccatccagaacaacttcttcgacagttcgaagcaagaggcc
attgacatcctgaggctgggctccacactcaacagtgatctggcagacaaagctcgggcc
ttgctcactacttccagtctttacgcctcccctagagtattgctgggaatgtgtcagaac
ttccataaatacacgcgacccaaacagatccgggtgtgtgtcggcacctggaacgtcaac
gggggtaaacagtttcgcagcatcgccttccgcaaccagacactcaacgattggctattg
gatgctccaaagaaggcggggcatcctgagttccaagacagcaaagccaaccccatagat
atcttcgccattggctttgaagaaatggttgaattgaacgctggaaacattgtcagcgcc
agcaccactaaccaaaaactgtgggcagctgagctacaaaaaaacctctcgcgggaccac
aagtatgtgctacttgcttcagagcagctggtgggggtttgtctgttcgttttcatccgt
ccacagcacgcacccttcatcagggatgttgctgtagatacagtaaaaactggaatgggc
ggagctacaggcaataaaggaggtgtggccatccgcctgctgttccacaccaccagcatc
tgcttcgtctgctctcacttcgctgccggccaatcacaggtcaaggagaggaacgacgac
tacaacgagatcacacgcagactcaccttccctatgggtcgtctgctgtactcacatgat
tacgtgttctggtgtggagacttcaactatcgaatcagcctgcctaatgaggaagtaaaa
gagctaatcaaacaacagaactgggacgccttgacagctggggaccagttgttcgatcag
aagaatgctggtttggtattccgtggatttatcgaggggaagttggattttgctccgacc
tataagtatgacctcttctcagaggattacgacaccagcgagaagtgccgcacaccagcc
tggactgaccgcatactgtggaagagaagaaagtggaattttgagcaaacagctgaggag
atgaatgtagtcggagcagcttctacatctggggagagtgaggatgatccagacaacccc
tggagccctgggactctgaagtactacggcagggctgagctcaagacctcagaccacagg
cctgtggtggcagtaatggacgtggacatcctggaggtcgacccggaggctcggcaccag
gtctacaaagatgtcatcgccctacaggggcctccggatggtactatcctggtgtcgctg
tgctcctccggtcccgacgactattttgacgatgcactcatcgatgagctgctggacaag
ttttctcattttggcgaagtcatcctcatcaggtttgttgaggagaagatgtgggtgacc
tttctggagggttactctgctctggctgctctgtctctcagcgcttccactgtccttggt
aaggtgattgacatccgtctaaagagtcccggctggattaagagtctggaggaggagatg
agtgtggataggatctgtggaagcattcccacctcggccagctccaccctgcttgcagag
gacacagacatgggcgacgatgattatgatatggaaggtgatgtggatgaggaggtggag
gagatccttcctcagcacctgcagcctggagcaggctccggccctggatcctcccctctt
ccctctccccgcagtagcccttgtccctcccctacacacggagaacccacagcccccagc
aggcccagccgctcggcccaaccctcccgaccgtcacaagggcctccttttgacttccag
cctggtgcacctacatctctagccctggagcccaaacgcccacctccccctcgtcccaac
gcgcccccagccagaccagcaccccctcaacgtccaccaccaccttcaggtcgaggtcag
gcaggagctcctggagctggaggtgttcccagaccaaacatccctcctagagctggggtg
atcagtattcctcctcagtctcgtcaacttcctccatctcaccctggagcacccagaccc
atccaagaggtgcatcctggggcccctcgacccattccagatacccacccaggagcacca
cgacctgtgaccaaaccaactgacctgcctcttggtcctccaccctcagggccacccgct
gcagtgagaccacaggttccatcacccatgcagccacccacgcagccccaacaagctgcc
ccttctgttcagtcccaactccctgcaccaatgcaacccacacttccagctccaatctac
ccacagcaagctcctcctgcctccactgctgctgcggcccccgctgggcctccacagggt
ctagcctctcccaaacccccaccacgttcccgctcctctcatgctttgccacctgatgct
gccaagtctgagacagcagccccagccactcagacgaatggactgaatggtatacaagga
gaagcacaatggaagcccgaccccttcgacacccttacatccgacttcctttactctaca
tcatctccctggcacaccacccagtccctgaccagagggtcctctctccggactcccccc
tccgttcttccgtcttcctccaacactctcccttcatccttctccctgcagacttccgtt
cgctcagacctgcagggactcgattcgacctcgtcctcctcctcgctctccactccgtcc
ccattcgcctcctgcctgctcccgcctcctccggtcccgtctcgaagtcgttcacaggag
acactgcgtgcctcacccagccccttcccgattgacccgcttcctgcccgacccagcagc
accaaccccttcactggcccggtggtgcagcagcagcatcaacagcgccgctctgtcaca
ccggacttcagcatccagggtccggcactgaaacctaaccttcaggggaccgtgtctgct
ctcactcagccactcatccccacccacgctccaacatcagcccctgcagctgcacccaca
gcccagctcccaaggaccatgtccctgtttggaccatcatccactcttaatcctgcacct
gctcctctcctgcccctcatccctgaccaagcccctgtccccaccttgcctctggcactg
ccctcttccatcccgcctgccctcgcgcctcgtcgtcagccgcctcctacaggagggaaa
ccaaccaagcagtgggtcactttcgatgacgcatcagattttccacctccgaccaaaaca
ctgcaagcccccatcttttcctccagttccctagtgtcccaaactcagactcagccttcc
cgctctgggtttgactcagagccggactggttatcctcagccccttcagtattcccaacc
ctccctcctcccattccgactagaactgcaaccagtaacccaaagctcccagaaggaccc
agtgatggctgcttcttccccagggagtcaacagaaagatag
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