Scomber scombrus (Atlantic mackerel): 133994006
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Entry
133994006 CDS
T10651
Symbol
ltbp3
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 3
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133994006 (ltbp3)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
133994006 (ltbp3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
133994006
NCBI-ProteinID:
XP_062289154
LinkDB
All DBs
Position
14:complement(11512967..11548743)
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AA seq
1233 aa
AA seq
DB search
MPSLISHLLVIWLSVHRLVWCTERSSTRERFKVVIAPLICKRICLKGQCQDTCEQGNNTT
LIAENGQGADTLIGQGFRVVVCPLTCMNGGVCSSRKHCLCPPGFTGRLCQFPLQQAQAAR
GNKQPVYPISLKPDGLKLTEQSGGGRTQLMQNHSVLTLPTQVGHHSSEVQINVRVHHTPD
TSVVIQPLDQSDVKPPHKTGTRPIPARHKPKGRCFQETTPKQACNSTPLPVLTNQEDCCG
SVGNSWGQNKCYQCPKLPXASVKQTIVEDYGSTCPQGYKRFNSTHCQDINECSMQGVCQN
GDCLNTLGSFKCSCKAGFVLDRNRCVESPAEQLAQCFLMASETRGCEHALPTHLTQEVCC
CTVGKAWGRHCERCPQVGTAAFSKICPAGKGYILQNIRETLAFPPXQVCFNQERPPETTT
AAQQNPTSTHSPRVPVVKPTPPTIIRLTNGNDPFETQTKVLPETDECRLSRNICGHGKCE
NSLNGHICHCYPGYHLNPQKNICEDDNECESEPCGHGRGLCINLEGSYKCHCRQGYKHMV
QHGRLKCIDVNECSKQDICGIGGQCVNLPGSYKCECHSGFRSKSHRHPACEDINECLNPD
TCPNEQCENTPGSYECVSCLPGHEARAGICYDVNECQKPGICPNGRCENLPGTYRCLCNE
GFLHSADSKGCRDIDECEDVRLCANGHCINTEGSFQCQCYPGYQRTQEGSHCEDINECER
PSLCQRGRCINNMGSYHCECQKGYTLVGGRRCQDTDECAADRSLCQPYGSCENRPGSYVC
VCNHGYVLSEDKHSCEAVRVMTDEKKECYLNLDDTVFCDSVLATNVTKQECCCSIGVGWG
DHCEIYPCPVSQSAEYHFLCPNGRGLYYDEGRLYSLPAYHDIDECSLFAEEICKKGRCEN
TLPDYECYCPQGFYYDSNLLECIDVNECHDESLCTNGQCVNIEGSFYCNCNHPWTSDSNK
KKCVIATVADVNECEDLANCKNGHCVDTPGSYYCICSPPWTLAIDRNRCVTPEEQADVNE
CQDPSYCMNGRCENTPGSFHCFCDPPLTFSAAQKQCVYDDRTAAHKDVCFLQVDEGLICS
EPRNGMVVTYSECCCHYGRGWGPECNTCPPRNSEMFSRLCEMHLETESDGEQDFLPAFAN
YNPGDSSEEESDECSCANGRCVRSYLGTMCECNQGFRLDHSRTRCIDIDECAERISPCKN
ARCVNTAGSYKCYCKHGFVATRRPNTCIRRRTR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgatctcccatctgcttgtcatctggctgagcgtccacaggctggtgtgg
tgcacggagcgctcctccacacgggagcgcttcaaggtggtcattgctcctctcatctgc
aagaggatttgtctgaagggacagtgtcaggatacctgcgagcagggcaacaacaccacg
ctgatcgcggagaacggacagggcgcagacacgctcatcggacagggcttcagggtcgtt
gtgtgtcccctgacgtgtatgaatggaggagtatgcagctcgaggaagcactgcctgtgc
ccacctggcttcaccggtcgactctgccagtttccactccagcaagctcaggcagcgcga
ggcaacaaacagcccgtctaccccatatctttgaagccagatggcctcaaactcacagag
cagtcaggtggaggacgcacccagttgatgcaaaaccactcggttttaaccctaccaaca
caagtagggcaccactcatcagaagtgcagattaatgtacgtgttcaccacacgccagac
acctcggtcgtcattcaacctcttgaccaatcagatgtcaaacctcctcacaagacaggg
acacgcccgatccctgcgagacacaaaccaaaggggcgttgcttccaggagaccacaccc
aaacaagcttgcaacagtaccccgcttcctgtcctgaccaatcaggaggattgctgcggc
agtgtggggaattcatggggacaaaacaagtgttaccagtgccccaaactgccanatgca
tcagtcaagcagaccattgtggaagactacggctccacctgtccacaaggctataaaaga
ttcaacagcactcactgccaagatatcaacgagtgctccatgcagggagtctgtcagaat
ggagattgtctgaacacactgggcagcttcaaatgttcgtgcaaagccggttttgtgctg
gacaggaatcgatgtgttgagtctccagctgagcagctggctcagtgcttcctgatggcg
tctgagacaaggggctgcgagcatgcgctgcccacccacctcacccaggaggtgtgttgc
tgcacggtgggcaaagcctggggccgtcactgtgaaagatgtcctcaggtgggcacagcg
gccttcagtaagatctgtcctgctgggaaaggctacattctccaaaatataagagagacc
ttggccttccctccctgacaggtctgttttaaccaggagagaccaccagagacaacgact
gctgcgcaacagaatcccaccagcacccacagtcctcgtgtgcctgttgttaaacccacc
cctccgacaatcatcagattgaccaacggcaatgaccccttcgaaacacagacaaaagtg
ttgccagagacagatgagtgtaggctaagcaggaacatttgtggtcatggaaagtgtgag
aacagcctgaacggccacatctgtcactgttaccccggctaccatctcaacccgcagaag
aacatctgtgaggacgataatgagtgtgagtcagaaccttgcggccacggcagaggcctt
tgcatcaacctagaaggaagctacaaatgtcattgtcgccaaggctataaacacatggtg
cagcatgggagacttaagtgcatagatgtgaacgagtgttctaagcaagacatttgtggt
attggaggccagtgtgtaaacttgcccggttcctataaatgtgaatgtcacagcggcttt
aggagcaagtcacaccgtcatccagcctgtgaagacataaatgagtgtttgaatcccgac
acttgtcccaatgagcagtgtgagaacacacccggctcctatgagtgcgtttcttgcttg
cctggtcacgaggcacgtgctggcatctgctatgacgttaatgagtgtcagaagcccggt
atctgtcctaatggccgctgtgagaacctccctggtacctaccgctgcctatgcaatgag
ggcttcctccattctgcagacagcaaaggatgcagggacattgatgagtgtgaagatgtc
aggctgtgtgccaacggccactgcatcaataccgaaggctccttccagtgtcaatgctac
ccgggataccagcgcacacaggaaggcagccactgtgaagatatcaatgagtgtgagaga
ccatcactctgtcaaaggggccgctgcatcaacaatatgggttcgtaccactgtgaatgc
caaaagggctacacactggttggaggcaggagatgccaagacacagacgaatgtgccgca
gacagaagtctctgccagccctatggctcttgtgagaacagaccgggctcatatgtgtgt
gtctgcaatcatggctatgtcctctcagaggacaaacacagctgtgaggcagttcgagtg
atgacagacgagaagaaggagtgttacctgaacctggatgacactgtgttctgcgacagt
gtcctagccacgaacgtcaccaaacaggagtgctgctgctccattggggttggatgggga
gatcattgtgaaatctacccctgtcctgtctcccaatcagctgagtaccacttcctgtgt
ccaaacgggagaggtctctactatgacgaaggacgcctgtatagcctgcctgcctaccat
gatattgatgagtgttccttgtttgctgaggaaatctgtaagaagggtcgctgtgagaac
acgctgccagactatgagtgctactgtccacagggtttctactatgacagcaaccttctc
gagtgtattgatgtgaacgaatgccatgacgaatctctgtgcactaatggccagtgcgtc
aacatcgaaggatccttctactgcaactgtaaccatccctggacttcagactccaacaag
aagaagtgtgtgatagcaacagtagcagatgtgaatgagtgtgaggacctagccaactgt
aagaatggccactgtgtggacactccaggatcttactactgcatctgctccccgccctgg
accctagctatcgaccgtaacagatgtgtgacacctgaggaacaggccgatgtgaatgag
tgccaggacccctcgtactgtatgaatgggaggtgtgagaacacgcccggctcctttcac
tgtttttgcgaccctcccctcaccttcagtgcagcgcagaaacagtgcgtctatgacgat
cgcactgcagcccacaaggacgtgtgcttcctgcaggttgacgagggcttgatctgcagc
gagcccaggaacggtatggtggtgacctactcagagtgctgctgtcactacggtcgaggc
tgggggcctgagtgtaacacctgtccaccgagaaactcagaaatgttcagtcgtctgtgt
gagatgcacctggagactgagtctgacggggagcaggatttcctgccagcttttgctaac
tataacccaggtgacagttcagaggaggagtcggacgaatgtagctgtgcaaatggtcgc
tgtgtccgctcctacctgggcaccatgtgtgaatgtaaccaaggctttaggctggaccac
tcacgcacccgctgtatagacattgatgagtgtgcagaacgtattagtccatgcaagaac
gctcgctgtgtgaacactgccggctcgtacaagtgctactgcaaacatggctttgtggcc
acacgcaggccaaacacatgtatccgtcgcagaactcggtaa
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