Scomber scombrus (Atlantic mackerel): 133994020
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Entry
133994020 CDS
T10651
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ssco01100
Metabolic pathways
Module
ssco_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
133994020 (xylt1)
Glycosyltransferases [BR:
ssco01003
]
O-Glycan biosynthesis
Glycosaminoglycan
133994020 (xylt1)
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Other DBs
NCBI-GeneID:
133994020
NCBI-ProteinID:
XP_062289174
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Position
2:complement(9059726..9134938)
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AA seq
947 aa
AA seq
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MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNVREKRDRVAG
NKAAGSDYFQHGVQRRQHHPPPGRGASRHIQQPDGYYSHRPKEKNRVDSNNENSVPKDFE
NIDNSNFGARSQPHRQSVGATSSKQQREHLQEKAHAQQQTWRESSPSLGRNSNEVLPVGH
QPLAVGNNASYAVGHGVAGGPRQNYHASQHAQQTQAQHRHQHPHRRQVTAAPLEVTYDQP
PKCEISGKEAISALSRAKSKECRQQIAEVYCRHKEGGLMPEKVTRYCPIEGKANANVQWD
EDSAESFPSKPVRIAFVLVVHGRASRQFHRLFKAIYHTSHYYYIHVDQRSNYLHRQVHAL
AAQYSNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWNWDFFINLSAADYPIRTNNQ
LVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSD
WFLLNRMFVEYVINSKDNLVTNMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITN
WNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDT
YLFGPFPQGTPALNSYWENMYDEPDGVASLSDTQLTYYHSFSRLGLARAAASLQGNPKDH
SCRYFPMGHPVSVHLYFQADQFQGYLVKHHATNLATSKLETMETWVVPKKNFKLTSPPAS
TFSRLLFAEIGTEWDAKERLFRNFGGLMGPMEETVGMQKWTKGPNVTVTVVWIDPTNVIA
ATYDILIDASAEYTHYRPPLNQPLRPGVWSVRILHHWSPVAEMRFLIVPLTFHKHQPIRQ
EDTLRFHNGPVKNSYMEQSFHGLNPVLNIPVSLSFVEQAKRNAALTGPELEHWLDSLVHE
QWEAADVCAVGLTACPVMQACSKNPWSSLSPDPKSQLRPPRADGRIR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttgtgtgctcgcaggttggcccgccggtcgcggtccgccctgatagca
gccctcacggtactgctggtgcagacgctgattgtgtggaacttcagcagcctcgactcc
ggcgaagacagggaaaacggaggctccaatgtgcgggagaagagggaccgggtcgcgggc
aacaaagccgctggcagcgactatttccagcacggggtccagcggcggcagcatcatccc
ccgcctgggaggggggcgtctcggcacatacagcagccggatggttattactcccaccgg
ccgaaggagaaaaacagagtggacagcaacaacgagaactccgtaccaaaagactttgaa
aacatagacaatagtaactttggtgctcgctcgcagccacaccggcagtctgtaggggcc
accagcagcaagcagcagcgggagcacctgcaggagaaggcccacgcccagcagcaaaca
tggcgggaaagctctccaagtctgggccgcaactcgaacgaagtgctccctgtagggcac
cagccgctggcggtcggcaacaacgcctcatacgcagttggtcacggcgtcgcaggaggg
ccgcgtcagaactatcatgcctcacagcacgcccagcagacccaggcacagcacagacat
cagcacccgcaccggaggcaggtgactgcagcgccgcttgaggtgacctacgaccagcca
cccaagtgcgagatcagtgggaaggaagccatttcagctctgtccagagccaagagtaag
gagtgccggcaacagatcgcagaggtgtactgcagacacaaggaaggcgggttgatgcct
gagaaggtcacccgttactgccccattgagggtaaagccaatgctaatgtccagtgggat
gaggactccgctgagagctttccatcgaaaccagtgagaatagcgtttgtcctggtggtc
catggacgagcctctcgccagtttcatcgcctcttcaaagccatctaccacacctcccac
tactactacatacatgttgaccagcgctccaactacctgcacaggcaggtgcatgccttg
gctgcacagtattccaatgtgagggtgacaccatggcgcatggccaccatctggggtggt
gccagtctgttgaccatgtatcttcgcagtatggctgacctgctggccatgagggactgg
aactgggatttcttcatcaacctcagtgccgcagattaccccatcaggaccaataaccag
ctggtggccttcctgtccaaatacagagacatgaacttcatcaagtcccatggcagggac
aacgccaggtttatccgaaagcaaggcctggaccgtctgttctttgagtgcgacacccac
atgtggaggctgggcgatcgcaaaatcccagagggcatctctgtggacggcgggtccgac
tggttccttcttaaccgtatgttcgtggaatatgtcatcaactccaaggacaatttggtc
accaacatgaaacgcttctacgcctacactctgctgcctgctgagtcgttcttccacaca
gtgctggagaacagtgcccactgtgagagcatggtggataacaacctgcgcatcaccaac
tggaaccgtaaactgggctgtaagtgccagtacaagcacatcgttgactggtgtggatgc
tccccaaatgatttcaagcctgcagatttccaccgtttccagcaaacagtgcggcccacc
ttctttgccaggaagtttgaagccagcgtgaaccaggaaatagtgaaccagctggacacc
tacctgtttggaccattcccccaggggacgccggccctaaactcgtactgggagaacatg
tacgacgagccagatggcgtggccagtctgtcggacacacagctcacgtactaccactcc
ttctcgcggctgggcttggccagggctgccgcctcgctgcagggaaacccaaaagatcac
agctgcaggtattttcccatgggccacccggtgtcagtgcatctttacttccaggcagac
cagttccagggctacctggtcaagcatcacgccaccaatctggccacaagcaagctggag
accatggagacctgggtggtacccaagaagaacttcaagctgacctctcctccggccagc
acattcagcaggttgctgtttgcagagatcggtacggagtgggatgcaaaagaacgcctg
ttccgaaactttggcggcttgatgggccccatggaggagacggtaggcatgcagaagtgg
actaaggggcctaacgtcaccgtcacggtcgtgtggatcgaccccaccaacgtaatcgca
gccacctacgacattctaatagacgccagcgccgagtacacccactacaggccgccgctc
aaccagcctctgcggcccggcgtgtggagcgtccgcatcctgcaccactggagccccgtg
gctgagatgcgcttccttatcgtccccttgacctttcataagcaccagcccatacgacaa
gaggatactctgaggttccacaacgggccggtgaagaacagctacatggagcagagtttc
cacggcctcaacccggtgctcaacatccccgtcagcctgagcttcgtggagcaggctaag
aggaacgctgccctgaccggcccagagctggagcattggctagacagcctggtgcacgag
cagtgggaggcggccgatgtctgcgccgttggccttaccgcctgccctgtcatgcaggcc
tgctccaagaacccatggagctccctgagcccagaccccaaatcccagctgagacctccg
cgtgcagacgggcgcatcaggtag
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