Scomber scombrus (Atlantic mackerel): 133994061
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Entry
133994061 CDS
T10651
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133994061 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133994061 (zmat2)
Spliceosome [BR:
ssco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133994061 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
133994061 (zmat2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
Cgr1
MG280
C2H2-zf_KIN17
DUF4250
Herpes_gp350_A
DUF6277
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
133994061
NCBI-ProteinID:
XP_062289222
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Position
14:29483332..29486501
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AA seq
202 aa
AA seq
DB search
MASGSGSNNKTDFRRKWDKDEYENMAQKRLTEERDRERRDGKVPPPVKRDLLRHRDYKVD
LESKLGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERS
SLDQVKKRFEVNKKKMEEKQKEYDFEERMKELREEEEKAKAYKKEKQKERKRRAEEDVDF
EEDDEMAAVMGFSGFGSSKKSH
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcagcgggtcgaataataagacggacttccgtcggaagtgggacaaagat
gaatacgagaatatggctcagaaacgtctcacggaggagagagacagagagaggagagat
ggtaaagtgccccccccggttaagagggacctgctgcgccacagagactataaagtggat
ctggagtctaaactggggaaaaccatcgtcatcaccaagacgacccctcaggctgagatg
ggcggttattactgtaacgtgtgcgactgtgtggtcaaagactcgatcaacttcctggat
cacatcaacggcaagaaacaccagaggaacttgggcatgtcgatgcgtgttgagcgctcg
tctctcgatcaggtgaagaaacgatttgaagtgaacaagaaaaagatggaagagaaacag
aaagagtacgacttcgaggagcggatgaaggagctcagagaggaggaggagaaggcgaag
gcgtataagaaggagaagcagaaggagaggaagcggcgagcggaggaggacgtagacttt
gaggaagacgatgagatggcggcggtgatgggattctccggcttcggctcctctaagaag
agtcactga
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