Scomber scombrus (Atlantic mackerel): 133994080
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Entry
133994080 CDS
T10651
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssco03021
]
133994080 (supt6h)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133994080 (supt6h)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133994080 (supt6h)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
133994080 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
133994080
NCBI-ProteinID:
XP_062289251
LinkDB
All DBs
Position
14:25952284..25970117
Genome browser
AA seq
1746 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDDEEEEENTEDQDERGNLRGLIDDGDEE
PEEEEEQEKKSGGGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDRV
KTLDDDEEDDEKDLIADEIFHADGDGELEDGETADEPLPQHEDDEEGEDEESDIDDFIVD
DDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEGWDR
PKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDELE
EEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQFEQISADPDKP
LADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKGGKKRVKKIKEE
TEDGDEEELEVEEEEEQKAPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRDS
YQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQER
AKINIKPTKKGKKEIDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEGLLTIDICIDL
IGVKGFAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQFLYPQMAKELKSKL
IAEAKESIVRSCCRRLYNWLKVSPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRDTP
VFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKNHDIETLKKFLSSKKPHVVAVTGE
TRDAQMIMEDFKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDYRDYPPLLRQA
VSIARKIQDPLIEYAQVCSTDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVGVDV
NKAIAHPHTQSLVQFVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEVFNML
TKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKTVKHPEERVKVGMTVHCRIMKIDIE
KFSVDLTCRTSDLMDKANEWKLPKDTYYDFDTESEDQKHEEELKKKQQRTPYIKRVIAHP
NFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFS
LGHTLWINSEEFEDLDEITARYIQPMASFARDLLGHKYFHECHWGSKEKMEELLVKTKRE
KPTFIPYFISACKELPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWFKD
HYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAAVTGQ
GQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPIATPMMTPSYSYTTPSQQA
LGTPQYPGSTPQSSHSHAHAHPHGGGHASHHSHHGHSSHHGHSSGTPSSSTSSRGRTPQQ
QPKPSSSNTSAVDWGKMAEQWLKEKEAEGRKKTQRMTPRPSPSPMIESTPMSIAGDATPL
LDEMDR
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcattgagagcgaggctgaggaatcagaggaagagtttgaagagaaagac
ctaaagcccaagaaaacccagaggtttatggaggatgatgatgaagaagaagaagagaac
acagaggatcaggatgagcgaggcaatttacgtggactgattgatgatggagatgaggag
ccggaggaagaggaagaacaggaaaaaaaaagtggaggtggcagtgactccgaagaggaa
gttaggcatcgacgtaaaaagcgcaattatgacgactacctggatgacgatgatcttgac
cttattgaggaaaacttgggtgttaaagtgaaacgaaggaagaagaaatatgaccgtgtg
aaaacactggacgacgatgaagaagatgatgagaaggacttgatcgcagatgagatcttc
catgccgatggagatggcgagctggaggacggtgagactgccgatgaacctcttccgcaa
catgaagatgacgaggaaggagaggatgaggagtcagatatagacgattttattgtggat
gatgatggccaacccatcaccaaaaagaggggcaagaaattttcaggatacacagatgca
gccctccaggaggcccaggagatttttgggggcgacttcgactttgctgactttgacgcg
gatgcctacgaccagggtgaggaggaggaagaggaccaggatgaagagggctgggacaga
cccaagaaacagaccaagaggaggcaagggaggaagagcatctttgagatctacgagccc
agtgagctggaaagtagtcacatgactgaccaagacaatgagatccgctccacagacatg
cccgagaggttccagttaaggtccatccctgttaaacctgctgaagatgacgagttggaa
gaggaagcagagtggatcttcagacatggcttctccactctaactatctccatgcaggag
agcacagattatcttgacagagggaccaccacaaacttcagcaggaaaggccccagcaca
attgccaagatcaaagaggctctaaacttcatgaggaatcaacagtttgaggttccattc
atagctttttacaggaaggaatatgtggagccagagctaaacatcaatgacctgtggaag
gtgtggcagtgggatgaaaagtggactcaactgaagacccgcaagcagaacctgacccgt
ctgttccggaagatgcagtcctaccaatttgagcagatctctgcagaccctgataaacct
ttagctgacggcatccgtcctctggacaccgctgacatggagagactgaaagatgtgcag
actctcgaagagctgggtgatgtgtacaaccactttctgctgtactatggccgagatatt
cccaagatgcaaaatgccgctaagggcggcaagaagagggtcaagaaaatcaaagaagag
acagaggacggtgatgaggaggaattagaggtggaagaagaagaggaacagaaagcacct
gacctgaagctggcgtctcgcagggatatgtacagcatctgtcagagcgtaggactcgat
ggcctggctaaaaagtttgggttgactccagagcagtttggagaaaatctgagagacagt
taccagcgtcacgagacagagcagttccccgctgagcctgtagagctggccaaagattac
gtctgcagtcagttcagcactcctgaagctgtgctggaagggaccaggtacatggtggcc
atgcagattgctcgagaacctctggtcagacacgtcctccgacagacctttcaggaaagg
gccaagatcaacatcaagcctacgaagaaaggcaaaaaggagatagacgaggctcacttt
gcctactccttcaagtatctgaagaacaaggctgtaaaagagctgaatggggatcagttc
ttgaagatgtgcctggcagaggaagagggactgcttaccattgacatctgcatagacctt
attggggtcaaagggttcgctggggaccagacatactttgatgagatcaaacagttttac
tacagggacgagttcagtcaccaggtgcaggagtggaacaggcagcgaaccttagctata
gagcgatctcttactcagttcctctaccctcagatggccaaggagctcaagagcaaactg
atcgctgaggccaaggagagcattgtcaggtcctgctgtcgccggttgtataactggctt
aaggtgagtccttataggccagatcagcaggttgaggaagacgatgatctgatggatgag
agtcagggcaaaggcattcgggtgcttggtgttgcctatgcacccagcagagatactcca
gttttctgtgctctgatcaatggagaaggagaggtggtggacttcctgcgtctgccctac
ttcatgaaaaggaggaatgcgttcagggaggatgagagagagaagaagaaccacgacatt
gaaactctaaagaagtttctgtccagcaagaaacctcatgtggtagctgttactggggag
accagagatgcccaaatgatcatggaggatttcaagaggactatcagcgagcttgagcaa
gagtcctctctgccagctgtgggagtggaacttgttgacaatgaattggccacactgtac
atgaacagcaagaagtctgaggttgattatagggattaccctccattgctgcgacaggct
gtgtcgatagccaggaagatccaggatcccttgatagagtatgctcaggtctgcagcact
gacgatgacattctctgcctcaaactgcacccgctgcaggaacatgtggtgaaggaggat
cttctctgtgctctctactgtgaattcatcaatcgagtcaatgaggttggagtggatgtg
aacaaggccatcgcccatcctcacactcagagcctggtccagtttgtttgcggtttggga
ccgaggaagggctcccacctgctcaagattctaaagcagaacaacactcgtctggaaaac
agaacccagctggtcacaatgtgtcacatggggcccaaggtttttatcaactgtgccggt
ttcatcaagatcgacactgcatcgctcggagacagtactgactcctacattgaggttctg
gatgggtctcgtgtccaccctgagacttatgagtgggcccgcaagatggctgtcgacgcc
cttgagtatgatgagtcggcagaagacgccaacccagctggagctctggaggagatcttg
gaaaatccggagcgtctcaaagatctggacctggatgccttcgctgaagagctcgagaga
cagggttacggcaacaagggaattactctgtatgatatccgtgcagagttgagctgcaga
tataaagacctcagagttgcctacagagtcccaaacactgaggaggtgttcaacatgctc
accaaggagactccagagaccttttatattggtaagctgatcaccagcatagtaactggt
attgctcaccggcggcctcagggagagagctacgaccaagccatccgtaacgactccaca
ggtctgtggcagtgtcccttctgtcagcaggacaacttcccagaactcagcgaggtgtgg
aaccacttcgacagcggttcctgtccaggtcaggctattggggtgcggtccagattagac
aacggcgtccagggattcattcccaccaagtttctcagtgacaaaacggtcaaacacccc
gaggagagggtgaaggtgggcatgacagttcactgccgcatcatgaaaatcgacattgag
aaattcagcgtggacctaacatgccgcacctcagatttgatggacaaggccaacgagtgg
aagctcccgaaggacacctactatgactttgacacagagtccgaagaccaaaaacacgag
gaggagcttaagaagaaacagcaacgaacaccatacataaagcgtgtgatcgcccacccc
aacttccacaatatcagtttcaaccaggcagagaagatgatggagaccctagaccaagga
gacttgattatcagaccaagcagcaagggagagaaccacctcaccgtcacctggaaagtg
gctgacggtatctaccaacacgtggatgtgagagaagaaggcaaagagaatgcattcagc
ttagggcacacgctctggatcaacagtgaagagtttgaagatctggatgaaatcactgct
cgctacattcagccaatggcatcatttgcccgagatctactggggcataaatactttcat
gagtgccactggggcagcaaggagaaaatggaggagttattggttaagacgaagagggag
aagcctacttttattccttactttatttcggcctgtaaagagctgccaggaaagttcata
ctgggctaccagcctcgtggaaaaccacgcgttgaatatgtgaccatcaccccggacggc
ttccgttaccgttcacagatatttcctacagtgaatgggttattccgctggtttaaggac
cattaccaagagcctgttccaggcatcacgcctagcaacagcagccgaacaaggacacct
gcatccctgaacgcaaccccagcaaatatcaacattgcagacttgacgcgagctgtcaac
gccctcccacgcaacatgacctctcagatgttcagcgcgatcgctgcagtcacaggccag
ggccagaacccaaacaccacccccgcacagtggggatccagtcagtacggctacggtggc
agcacaggaggaggaggagggagctcctctgcttatcatgtgtttgccacacctcagcag
cccattgcgacgcccatgatgacacccagctactcctacaccacaccgagccagcaggcc
ctgggcacaccgcagtaccctggctcaaccccacagtcctcacactctcacgcccacgcc
cacccacacggtggaggccacgcatcacaccacagccatcacggccacagcagtcaccac
ggccactcctcgggcacgccgtcatcctccacatcatccagaggacggacgccacagcag
cagccaaagccgagcagcagcaacacctccgcagtggactggggcaagatggcggagcag
tggctgaaggagaaagaggcagagggacggaagaaaacccagaggatgacgccacgacca
tcccccagccccatgatcgagagcacacccatgtctatcgccggggacgccacacccctg
ctggatgaaatggatcgatag
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integrated database retrieval system
