Scomber scombrus (Atlantic mackerel): 133994106
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Entry
133994106 CDS
T10651
Symbol
prom1b
Name
(RefSeq) prominin 1 b isoform X1
KO
K06532
prominin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133994106 (prom1b)
04090 CD molecules [BR:
ssco04090
]
133994106 (prom1b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133994106 (prom1b)
CD molecules [BR:
ssco04090
]
Proteins
133994106 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Motif
Other DBs
NCBI-GeneID:
133994106
NCBI-ProteinID:
XP_062289289
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Position
2:complement(25237767..25271781)
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AA seq
893 aa
AA seq
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MLWTRWLVLLLCWGGTSGEQQADERDGFPAEVRADSRRQRSPPPVEPLDFGFVPSSVYDT
HAYYEPGAVGILFHMVHAFLYVIQPNSFPKDLIVKVIQQNMGGIKIDEWRKPENVVLLLQ
WIHYQAGFLLCGLIGIVFVIIVPVIGLLFCVCRCCENCGGEMHQRQRKNADCQRGFYTAS
LVATTIFIIVGVLISYAANHNISAQIKSTRRLINTNMRDLKTFANNTPAQIDYLTAQYTT
AKNKVLSDLDNIGPLLGGRIHSQLEKEVVPSLDTALRMAGAMRETKEALENVSSSLEVLQ
EGTGKLQSSLSGERASLSNTLSDPACTNGAVSHTCNTIRSTLAQLGINADYSGLPSVSHA
LANVDTILKTDLSNVVQKGYSSFNDTPRLVKEQTKNIVAGVKGMLDKISAEITGFSKMFP
VEASLANFTIFLNQGQKNIEAYYPQIDQMDFYRWIGCVAVLCAVVLILAFNFLGLLCGTC
GYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFVWMLMAIVTTFFVVGGNVEKMVCEPLAN
RQLFKIIDTPYLVHPAKKNFLPGMLFQNPNIDLTLGSMYRDCYENNGLYHALQLETMFNI
NSFLNRTAYNKDLAKVFESVQVDLQDITLLEQAGRDNLINFANSGVGQIDYDAFMAEVNK
GVTIVDLLTFSTDLEAQADQLPRGALENALKGHASSIRQIHREQVVPMEQAMSTLSQSIR
LLQRTSSDLPIKVTNILSAIDAAEYLITHNASHVVKQETKNYVQTLVGYFKQYTAWIKNS
LTAEVAQCKPISNIVDSMEIVACSFIVDSVNVFWFGLGGCCVLLIPSMILSTKLAKYYRR
MDTEDVFEDMGNTGNHGEQVCDIHGNLVVVSSPYSDTLTRFPRASAPPSYSDW
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggacaaggtggctcgtcctgctgctctgctgggggggcacaagcggcgagcag
caggccgatgagagggacgggttcccggctgaggtgcgggcggactcccgcagacagcgg
tcccctccgccggtggagccgctggactttggttttgtaccgtcgtctgtttatgatacc
cacgcttactacgagccaggagccgtgggcatcctcttccacatggtccacgcttttctc
tatgtcattcaacccaactcctttcccaaagatctgattgttaaagtcattcagcaaaac
atgggaggaatcaaaatagacgaatggagaaagccagaaaacgtcgtcctattgctacag
tggatccactaccaggctggtttcctattatgtgggttaatcggtatcgtcttcgtgatc
atcgtccccgtcataggcctgctgttctgtgtgtgtcgatgctgtgagaattgcggaggg
gagatgcaccagagacagaggaagaacgctgactgccagcgagggttttacaccgcctca
ctcgtcgccactaccatcttcatcattgtgggagtgctcatttcctatgctgcgaaccac
aacatcagcgcccagatcaagagcactcgtcggctcatcaataccaacatgagagacctg
aagacatttgctaacaacacgcctgcgcaaatcgattacttgacagcgcagtacacaaca
gcaaagaacaaagtcctgtcagatcttgacaacattggacctttactgggtgggaggatt
cacagtcagctggagaaagaggtggttccctcgctggacactgccctgcgtatggcagga
gctatgcgggagactaaggaggccctggagaatgtcagctcctctttggaggtactccag
gaggggacaggaaaacttcagagcagtctgtctggagagcgcgcctctctgtccaacacc
ctctccgaccccgcctgcaccaacggagccgtgtctcacacctgcaacaccatccgctcc
acgctagcccaactgggaatcaacgccgactattccgggcttccaagtgtcagtcatgct
ctggctaatgtcgacaccatcctgaaaacagacctcagtaatgttgtacaaaagggttac
tcatcgtttaatgatacaccaagactggttaaagagcaaaccaaaaatattgtcgcagga
gtgaaaggcatgctggataagatcagtgcagagatcaccggtttctccaagatgttccca
gtggaagcatctctggccaatttcaccattttccttaaccaaggacagaagaacattgag
gcgtattacccacagatcgaccaaatggatttctacaggtggatcggctgtgtggcggtg
ctctgcgcggttgtcctcatcctggccttcaacttcctgggtctgctgtgtggcacctgt
ggctacgacaagcaggctacacccacaacccgagggtgcctgtcaaacaccggaggaaac
ctgctcatggccggggtgggcttctccttcatcttcgtttggatgctgatggccatcgtg
accacattttttgttgttggtggcaacgtggagaagatggtgtgcgaaccgctggctaac
cgacagctattcaagatcatagacacaccatacttggtgcatcctgccaagaagaacttc
cttcctgggatgctgtttcagaatccgaacattgacttgactttgggaagcatgtacagg
gattgctatgagaacaatggtctgtatcatgctctgcagctggaaactatgttcaacatc
aactccttcctcaacagaactgcgtacaacaaagatctggccaaagtgtttgagagtgtg
caggtcgacctgcaggacatcacactgctggagcaggcgggcagagacaacctcatcaac
tttgcaaactctggagtcggacagatcgactatgacgcgttcatggcagaggtaaataaa
ggagtcacaattgtggatcttctgaccttctctactgacctggaggctcaggctgaccag
ctgcctcgtggtgctctggagaacgcactgaaaggtcacgccagcagtatcagacagatt
cacagagaacaggtggttcccatggagcaagcaatgagcaccctgagccagagtatcaga
ctgctgcagagaacttccagcgacctgccgatcaaggtcacaaatatcctgagtgccatt
gatgcagcagagtacctcatcactcataatgcctcccatgtggtgaagcaggaaacaaaa
aactacgtacagaccttggtgggatacttcaaacaatacacagcatggattaaaaactct
ttgactgcagaagtggcccagtgtaaaccaatcagtaacattgtggacagcatggagata
gtagcctgcagcttcatagtcgattcagtgaacgtattctggtttggactgggaggctgc
tgtgtcctcctgatccccagtatgatcctctccaccaaactggccaaatattacagacgg
atggacacagaggacgtctttgaagatatgggtaatacaggtaaccatggtgaacaagtg
tgcgatatccatggaaaccttgtggtggtcagctccccctattccgacactctgacccgg
ttccctcgagcgtctgctcccccgagttactccgactggtga
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