Scomber scombrus (Atlantic mackerel): 133994141
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Entry
133994141 CDS
T10651
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133994141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133994141
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133994141
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133994141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
PA
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
133994141
NCBI-ProteinID:
XP_062289339
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All DBs
Position
14:6753183..6846595
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AA seq
831 aa
AA seq
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MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIMVTLLKQEPTRKPITLEGVF
VGGSAGNAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALEKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVQAKDAEELMSLVNKNEEAKVQIKILLEQH
RWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAINRLETKTYNSQGC
SASQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGEDKHISSTERQPQRSRHQQSSEQMQGFLHSQPYSSPRNHPFPQHDIPFSMRP
HYPRGPSGHYPSLGHYSGSSPMDAQTLRFLASRPLGSSCGYHLPAEGPGRPHRIGGNCRT
STHHYTPRRSCHNYRSSCPAQRSASSSRLHHTTSVAPQNRGAPPHSRQEDGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYG
PGPGRAPRRNSLEAGAQARPRSLDSVVNKAGCTEEQPQTVFSHIHYHRHRHHHYEEGEHS
QGPSRGSDEEQGAAAAVAAAAAPAALVLDKDSPVCPPKHSPCQCPKPDPTDRPGPGTEGQ
DHDPGSPTGPSVLVSPIPLQLQPHCCHQGHGHPPNPRGRVGGCVLEGPSVRFHQSLDLQD
DRSVHIHYGQGPGFCCSPPELRPALLPVPLILDSGGMEEWPCCAGAHVVWQKRVQQARSE
PQLLGPGTSMDRPPCRFHHSPAADRNTDICLYCQTLHHNQGGCLISLSLIA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagcggtcatc
atggtgacactgctgaagcaggagccgacgcggaagcccatcaccctggaaggggtgttc
gtgggaggtagtgccggcaacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacgagtgaggatgaacgacaagagagtgacttcatcaccattgtcaaactggag
cacagggtacctcgctgtctgccgctgctcgataaggctcgcatggcactggagaaagga
gctcaggccgttatcttcgacgtcagcgatgatgccaatgctgctgctgagctgcgagaa
acagactctcttccccgtccagtcgtgctggtgcaagctaaggatgctgaggagttgatg
agtctggtcaacaagaacgaggaggccaaagttcaaatcaagatcctgctggagcagcac
agatggccacattatgatgtgggtatcctgctcaccatcgtcctggctattctgaccatc
gtcctaatctttgctttccgctacaagtgcaaatccaacagaacctgggactctgtccat
cagcagaccatgcgggccattaatcgattggagaccaaaacctacaactcgcagggctgc
tcggcctcacagcgccaccgtgcagcctggggctcagccagcagctccaactcaagtccg
gtctgtgctatctgcctggaggagttccaggatggacagcatctgaggatcatctcttgc
gctcatgagttccataaagactgcgtcgacccctggcttctgcagcaccgcacctgtccc
ctctgcatgcacaacatcatgggtgaggacaagcatatttccagtacagagcggcagccc
cagaggagcaggcaccagcagagttcggagcagatgcagggctttctgcactctcagcct
tacagcagcccacgcaaccaccccttcccccaacatgacatccccttctctatgaggccc
cactaccctcgcggaccctctgggcactatccctccctcggccactacagtggttcttct
cccatggacgcccaaacattacgtttcctcgccagcaggccgctcggctcctcctgcggg
taccaccttcctgcggagggtcccgggaggccccacaggatcggaggtaactgcaggact
tccactcaccactacaccccccgtcgatcctgccacaactatcgctcgtcctgtccggct
cagcgcagcgcgtccagctcaagactgcaccacaccacctccgtcgcgccacagaaccgg
ggagcgccaccccacagccggcaggaagatggcagctgctccggcggcagctaccacaca
gaacgcagcggatacttagccgatgggccggcaagtgactccagctcagggccgtgccac
ggctcctccagtgactcggttctcaactgtactgatgtgtccctgcagggggtttatggc
agctggtccaccttccgtagctctctgagtagtgactatgatccgtttgtatattatggg
ccaggtcctgggcgcgccccccgcaggaacagcctggaggccggggcccaggcccggccg
aggtctttggattctgtggtgaacaaagcgggctgcaccgaagaacagccacagactgtg
ttcagccacatccactaccaccgccacagacaccaccactatgaggagggggagcacagc
cagggcccgagcagaggctcagacgaggagcagggggcagccgccgccgtcgctgccgca
gccgcacccgctgccctcgtactggataaagactcacctgtatgccctcccaagcacagc
ccctgccagtgcccaaagccggaccccacagatcggccgggccccgggacagagggtcag
gaccatgaccccggcagccctacgggaccctctgtcctggtgtccccgatccccttacag
ctccagcctcactgctgccaccagggacacggacaccctcccaatcctcgtgggcgagtg
ggtggctgtgtgctggaaggcccctctgtccgcttccaccagagcctggatctacaggac
gaccgtagcgtccacatccactacggccaaggcccgggcttctgctgctcgccccccgag
ctacgccccgccttgctccccgtacctctcattctggactctggaggtatggaggagtgg
ccttgctgtgccggggcacatgttgtgtggcaaaagcgggtgcagcaggctcgctcggag
cctcagctgctggggcctgggacctctatggacaggccaccctgcaggttccaccacagc
cctgctgctgaccgcaacacagacatttgtttatactgccaaacattacaccacaatcag
ggtgggtgtctcatttctttatctttaatagcatga
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