Scomber scombrus (Atlantic mackerel): 133994167
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Entry
133994167 CDS
T10651
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133994167 (capns1a)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C2: calpain family
133994167 (capns1a)
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GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
133994167
NCBI-ProteinID:
XP_062289367
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Position
14:3903040..3910159
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AA seq
216 aa
AA seq
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MFLAKKLIGGLIDVVSNIDPAQFVPTDPPPPRRPVAYAEQHESDEEKQFRRVFQQLAGDD
MEVSPTELMNILNRIISKHGDLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKHLWNNVK
KWQAMYKSYDSDGSGVISAEELPNAFRAAGFPLNDQLFQMLIRRYSDENGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNNGTIKVNIKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttgccaaaaagttaatcggtggcctcattgatgttgtcagcaacatcgaccca
gcccagtttgtgcctactgatcctcctccaccacgcaggccagtggcgtacgcagagcag
cacgaaagcgatgaggagaaacagttccgcagagtcttccagcaactagccggagatgac
atggaagtgagcccaactgagctgatgaacatcctaaacagaatcatttcaaagcatgga
gacctgaagacagacggtttcagcattgagtcctgtaggagcatggtggcagtcatggat
agcgacagcactggtaaactgggcttccatgaattcaaacacctctggaacaatgtaaag
aaatggcaggcaatgtacaagtcctacgactctgatggctccggtgtcatcagtgcagag
gagctacccaacgcttttagagctgctggcttccccctcaacgaccagctgttccagatg
ttaattcgcagatacagcgacgaaaatgggaacatggatttcgacaattacatcggctgc
ctcgtgaggctggacgccatgtgtcgtgccttcaaaaccctggataaggataacaatggg
accatcaaagtcaatattaaggagtggcttcagttgaccatgtactcttga
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