Scomber scombrus (Atlantic mackerel): 133994173
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Entry
133994173 CDS
T10651
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133994173 (nfrkb)
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GFIT
Other DBs
NCBI-GeneID:
133994173
NCBI-ProteinID:
XP_062289374
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Position
14:12476440..12485068
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AA seq
1288 aa
AA seq
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MDALTHMLTDPLDPKEENDGQITEECMLGNCRVSLPEDLLEDPEIFFSVMSESTWTEVLS
DSQRQHLRQFLPQFPDNKVAEQDSTISDLFNNRNFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKRQLYSFQQYYHRLLKQILVSRKELLEYAVHNGLDFPPKKKLPNKTHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISLWTPAPQSPSSPTPTVSLRVLPSLSTQD
MKTTEKMELGERDLKNMLQNHREKRKRQPDHPDLMTSDIHLGDILSRANIGRKGTMLAMF
LSFYLAALFDLSLPKKKIRDERRKKKMRTIKVESEDPCETLTPLDTPSAPPANIINSLPD
KPSTPLPNIKEEMVEESQSSPVMVEEIAVSFFSLLETIVRAELLASTLMIEEKVQMWQSS
PASSLNVWFSSASCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFSEESQQWRWIGPT
QDTEKDLSALFQLWLDSKDLVVKTENEELMEMTSPTPRVSTDYVVRPSTGNERQVFQIQE
QQRYNQPHKAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRD
AAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRK
LWIYLHRNRTQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGVSKTPGCLEAGQ
DIGSNPMSPTPSTPTPNTPGTPKSPLPFTTTTPTKTVVQDAIKTSPGVLLVSPPSLPQLG
TILPTTQTGPPVSQPVTSQHAARIVSHLAAGSLPQVRVVSAQSGLGAAAGSQQATLVHQT
PHQIRMPVSVAAKGISQTVVSVPLRSQSSSSPVQVPPTLSVSTVTVTKPQTGSPGSPANN
PTSPAVLQGVASSNIKQVSITGQLGMKTSGGAGIPITATNLRIQGKDVLRLPPSSITTDA
KGQTVLRITPDMMATLAKSPVATVKLTPDFLGTGATGSKSISATLHVTPPHHSPSSVSSA
TSCTGDAQTTKTGPVTSTLLKAAGDTAIRLMPTLAVTMADQKSRTFTTVSSPDKSGATIR
IMPGLGVIPQKQGQTITMTTTSGSKPLTVSTCANVVTMAASVVAGAKGITVAPGVSGSPL
TLGTATATVRQVPATVVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPIVKGSLNQNISS
LGRNIILTTMPAGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVPAQQLQQHMATG
SPKSVSTVVVTTAPSPKCAPDPPPAPQK
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctcacccatatgcttacagaccctcttgatccgaaagaagaaaacgatgga
caaatcactgaggagtgcatgctggggaactgtagagtgagcctcccagaggacctactt
gaagatcctgaaattttcttctctgtgatgagtgaaagcacatggactgaagtactgtca
gattcccagaggcagcaccttcgtcagttcttgccacagtttcccgacaacaaggttgca
gagcaggacagtaccatcagcgacctatttaacaacagaaattttaattttggaaatccc
cttcatcttgcacagaagctattcagagatggttacttcaatcctgaggtggtcaaatac
agacaactgtgtgccaagtcccagaggaagcgacagttgtactcctttcagcagtattac
cacaggctgttgaaacagatccttgtctcaagaaaggagttgctggagtatgcagttcac
aatggtctggactttccaccaaaaaaaaagctaccgaacaagactcatgctgaaatgcgg
gagccaagggtcagaagaagactgagtcgcattttaaaggaggtcaaaacagagtgtggt
gacagcaatgcttcatccgatgatgatgacatatcattatggacaccagcaccacaatca
ccttcttctccgacacccactgtctcgctgagagttttgcccagcctttccacccaagac
atgaagaccactgagaaaatggaactaggagagcgagatttaaaaaacatgctgcaaaac
catcgagaaaagagaaagcgacagccagaccatccagacttgatgacttctgatatccac
ctcggagacattctctcaagagcaaatattggtcggaaggggactatgcttgccatgttt
ctgtctttttatcttgcagcactctttgatctgtctctgcccaaaaaaaagataagagat
gagagaaggaagaagaaaatgaggacaataaaagtggaatctgaggatccctgtgaaact
ctcacacctttagacaccccctcagctccaccagcaaacatcatcaactccctgccagat
aaaccatctactccactgcccaacatcaaggaagaaatggtggaggagtctcagagcagc
ccggttatggttgaggaaatagctgtcagtttcttcagcttgttggagactatcgtgagg
gcagaactcctcgccagtactttaatgatagaggagaaagttcaaatgtggcaatcctct
ccagccagttccctcaatgtgtggttttcctctgcctcatgttggtccgacttggttctt
caagctctgcagtttcttgcaggagagactaaagatggcatgatggcactgccgagtggc
ttttccccatttgtggaattttcagaagaatctcagcagtggagatggattggtcccact
caggatacagagaaagatctcagtgctctctttcagctgtggctggactcaaaagattta
gttgtcaagactgaaaatgaagaactcatggagatgacttctcccacaccgagagtttcg
actgattacgtggtgcggcccagcactggaaatgagagacaggtgtttcaaatccaggag
cagcaaagatacaaccaaccacataaagccttcacattcaggatgcacggttttgaatct
gtggtggggcctgttaaaggggtgtttgataaggagatgtctctcaacaaggccagggag
cacacactgctccgttcagaccggccaccatacgtcaccattctctctctggtgcgggat
gcagcagccaggttacccaacggagagggaaccagggcagagatctgtgaactgctgaaa
gactcacagtttctcgctccggatgtcactagtgcacaggtgaacacggttgtcagtgga
gccctggatagacttcactatgagaaagacccctgtgtgaagtatgacattggccgcaaa
ctatggatttacctgcaccgcaataggactcaagaagagtttgagaggattcaccaggct
caagctgctgccgcaaaagcacgaaaagctctacagcagaaacctaaacctgcatcaaag
cctaagtccggaagtaaagacggagtcagtaaaacacctggatgtctggaggcaggacag
gatataggctccaatccaatgtcaccaaccccttcaacacccaccccaaacacacctgga
acccctaagtcacccttacccttcacaaccaccacaccaacgaagactgtagtccaagat
gcaataaaaaccagcccaggtgttctccttgtgtcccctccctctttaccccagctggga
accatcttacccaccactcagactggtccaccagtatcacagccagtcacgtcccaacat
gcagctcgtattgtgagccacttggcggcaggctccctccctcaagtacgggttgtttct
gctcagtcaggtctgggtgctgcagcaggaagtcagcaggccacgcttgtacaccagacg
cctcaccagatcaggatgccagtctcagtggcagccaagggcatttcacagaccgtggtt
tcagtgcctctgaggagtcagtcttctagtagtccagttcaggtgccacccaccctgtct
gtctctactgtaactgtgaccaaacctcaaacaggatcacctggtagcccagctaataac
cctacctcacctgctgtgctgcaaggagtcgccagctctaacatcaaacaggtgtccatc
acaggccaattaggaatgaagacttcaggaggagcaggaattccaataactgcaacaaac
ctacgaatccagggtaaagatgtcctacgtcttccaccatcctccatcaccacagatgct
aaaggtcagacggtgcttcggatcaccccggacatgatggcaactcttgccaaatcccca
gttgcaacagtcaaactcacccctgacttcctgggcactggtgccacaggcagcaagagc
atatcagccactctccatgtgacaccaccccaccattcgccttcctctgtctccagtgct
acatcctgtacaggggatgcacagaccactaaaacaggccccgttacctccaccttgttg
aaggctgcaggagacacagccatacgtctgatgccaacattagctgtcactatggctgac
caaaaatcaaggaccttcaccaccgtctcctcccctgacaagagtggcgccacaattcgt
ataatgcctggcctcggtgtcattccacagaaacagggtcagaccatcacaatgacgacc
acttctggcagtaaaccgctcacagtgtccacatgtgctaatgtagtgaccatggctgcc
agtgtagtggctggtgcgaagggaatcacagtggcccccggagtctcaggctcacctctg
acactaggaacagctacagctactgtgcggcaggttcctgctacagtggtcaccacacaa
acagggaagttacctgcacggatcacagtgcccctctctgtcctcaaccaaccacttaag
agtaaaagtgtagtgaccacacctattgtgaaaggaagccttaatcaaaatatcagcagt
ctgggaaggaacatcatcctgaccaccatgcctgctggtacaaagctgatcgcagggaac
aaaccagtcagctttgtcactgcacaacagttccagcagcttcagcaacaaggacaagcc
acacaggttcggatccagacggttccagcgcagcagcttcagcagcacatggcaactggc
tccccgaaatctgtctccacagttgtagtcacaacagcaccttcaccaaaatgtgcacct
gatccccctcctgcacctcaaaagtga
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