Scomber scombrus (Atlantic mackerel): 133994178
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Entry
133994178 CDS
T10651
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133994178 (si:zfos-323e3.4)
Ion channels [BR:
ssco04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
133994178 (si:zfos-323e3.4)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_6
LRR_At5g56370
LRR_EndoS
LRR_9
LRR_13
LRR_LRWD1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
133994178
NCBI-ProteinID:
XP_062289383
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Position
2:16394277..16398510
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AA seq
806 aa
AA seq
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MIPLGEFRNLGTEQSSQYRVLKPWWDVFSEYLCVAMLMIGVFGCTLQLTQDKIACLPSPF
TSPTPEVIDCSHIRTYGENETWEHKPMSPIVREVVGRKNNLDIHQYVFVNHYCYERFVHW
YAKYFPYLVVIHTMVFMVASSFWFKFPGTSSKIELFVTILGKCFDSPWTTRALSEVSEER
GEEKLVSWRRNTMSKDSTDRRAEEEETVGLLRSSSVKSNQEKKIPEPQSAASVLDKKEGE
QAKALFEKVKKFRTHVEEADLLYIMYVQQTSIKVFKFVLIIIYTAALVPNIEIVVRCLVP
PELTGFDIYCCNHNKAHLFSKLAYCYICFVGVYGLLCIYTLYWLFHRPLKEYSFEQVRLE
TGINDIPDVKNDFAFLLHLVDQYDALYSKRFAVFLSEVSESRLHQLNLNYEWTAKKLRTR
LSKNANDRLELHLLMLPGLPDTIFEIPEVQSLKLEQVKNVTISASVAKFESLQELSLIYC
PAKLQLPALNHLKENLKVLCVAFESVEEVPLWMYSLHGLEELHLNGPLTNEVSRGATLDS
FRELKALRVLTLRSNLTKIPPSVADVATQLQRLCIHNEGSKLQAFSSLKKLTNLVSLELV
GCGLERIPSAVFSLNNLQELDLKENKLTTVEEILSLQHCRRLVTLRLWHNKITYIPDHIS
KLHTLETLDISWNKLRKLPSRLFYCTKLRHLDVSHNQITTLPPEVGILQGLQVFSAAFNS
LEMLPEELFSCKRLKMLALGNNCLSYLSSRVANLAQLVRLEIKGNRLESLPVEIVDCVLL
TLNGLIVEDNLLDLLPSDVRSRLSNG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatcccactgggtgaattcagaaacctcggcacagagcagtcctcacagtatcgtgtc
ctgaagccttggtgggatgttttctcagagtacctgtgcgttgctatgcttatgattgga
gtctttgggtgcaccttgcagctcacccaagacaagattgcgtgcctgcccagtcctttc
accagcccaacacccgaggtaattgactgcagccacatccgtacctatggtgagaatgaa
acatgggagcacaagcccatgagccccatcgtgcgggaggtggttggtcgcaagaacaac
ctggacatccaccagtacgtgtttgtcaaccactactgctatgagagatttgtgcactgg
tatgcaaagtacttcccctacctcgttgtgatccacactatggtcttcatggtagcaagc
agcttttggttcaagttccctgggacatcctcaaaaattgaactctttgtcaccatcctt
gggaaatgctttgattcaccctggaccacaagggccttgagtgaagtttctgaggaaaga
ggagaagagaaattagttagttggaggaggaacaccatgtcaaaagactccacagatcga
cgagcagaggaggaggagactgtagggcttcttcgatcctcctctgtcaagtctaatcaa
gaaaagaaaattccagagcctcagtcagccgcctctgtcttggataaaaaggaaggcgag
caggccaaggctttgtttgaaaaggtgaaaaagttcagaactcatgtagaagaggcggac
ctcttgtatatcatgtatgtgcaacaaacatcaattaaagtctttaagtttgttttaatc
atcatctacactgcagcactggttccaaacattgagatagtggtgcgctgtttggttcct
cctgaactgactggttttgatatctattgctgcaaccacaacaaagcccatcttttctct
aagcttgcctactgctatatctgctttgtgggagtgtatggacttctttgtatctatacc
ctctactggctgttccatcgacctctgaaggagtactcctttgagcaagtcagactggag
acggggattaatgacataccagatgttaagaatgactttgcgttcctcctgcacctcgtg
gaccaatatgatgctctttattctaaaagatttgctgtctttctctctgaggtcagtgag
agccgtctccatcagctcaacctcaactacgagtggaccgccaaaaagctgcgtactcgt
ctgtccaagaatgcaaatgaccggttggagctccacctgttaatgttgccggggcttcct
gacacaatctttgagattcctgaggtgcaatcactcaaactggagcaagtaaaaaatgtc
accatctcagccagtgtggcaaagttcgagtctctgcaggagttatcactgatttactgt
cctgcaaagctccagctgcctgccctgaaccatctcaaggaaaatttaaaggtcctgtgt
gtagcttttgaaagtgtagaagaggtgcctttgtggatgtacagcttgcatgggctagaa
gagttacatctgaatggtccattaaccaatgaagtgtcccgaggcgccaccctagactcc
tttcgagagcttaaagcgctgagagtccttactctgcgctccaacctcacaaagatccca
cccagcgttgccgatgttgcaacgcagttgcagcgtttgtgcatccataacgaaggcagc
aagctccaagctttcagcagcctgaagaagttaaccaacctagtctcactggagttagtg
ggctgcggtttggagcgcatcccgagtgctgtcttcagcctgaacaatctgcaggagttg
gacctcaaagaaaacaaacttaccactgtggaggagattctgagtctacagcactgccgg
cgtttagtgacactccgactgtggcacaacaaaatcacttacatccccgaccacatcagt
aagctccacaccctggagacactggatatcagctggaacaagctgcgaaaacttccctct
cgactattctattgcaccaagctcaggcacctcgatgtttcccacaaccagatcaccacg
cttcctcctgaagtgggcatcctgcagggcctccaggttttctccgctgcattcaactct
ttagagatgctgccagaggagctgttctcctgtaaaaggttaaagatgttggctctcgga
aacaactgcttgtcgtaccttagctccagagtggccaacttggctcagctggtccgccta
gagatcaaagggaaccgtctggagtctctaccagtggagatagtggactgtgtcctgctg
actctcaatgggctgatagtagaggacaacctgctggatctgctgccatcagatgtacgc
agcaggttgagtaatgggtga
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