Scomber scombrus (Atlantic mackerel): 133994209
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Entry
133994209 CDS
T10651
Name
(RefSeq) claudin-15-like
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133994209
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133994209
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133994209
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133994209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133994209
04147 Exosome [BR:
ssco04147
]
133994209
04515 Cell adhesion molecules [BR:
ssco04515
]
133994209
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133994209
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133994209
Exosomal proteins of colorectal cancer cells
133994209
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133994209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
133994209
NCBI-ProteinID:
XP_062289414
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All DBs
Position
14:10984476..10988414
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AA seq
224 aa
AA seq
DB search
MNAIVEAFAFFLGFLGWLMVGVALPNRYWRVSTVDGNVITTSTIYENLWMSCATDSTGVH
NCRDFPSLLALNGYIQASRALMIAAIVFGTFGLVATLAGMQCSKIGGENYILKGRIAAIG
GVFFLLQGICTMIAVSWYAANITQQFFDQFYPGTKYEIGEGLYIGWSSATLSICGGSCLL
CACRIITPNDKIPYPYQPSSRGHVLSTVAMSQSVPSNYDRNAYV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatagtggaagcttttgccttcttcctgggcttccttggctggttgatggtt
ggcgttgcacttccaaatcgatactggagagtctctacagtggacggtaatgttattacc
acatcaaccatctatgaaaacctatggatgtcctgtgcaactgactctacaggagttcac
aactgccgggattttccatctttgctcgcacttaatggatacatacaggcctcccgagca
ctgatgattgctgccattgtgtttgggacatttgggcttgtggctactcttgcaggaatg
cagtgctctaaaataggaggagaaaactacatcctgaagggaagaattgctgcaattgga
ggagtgttctttttactacaggggatttgcacaatgattgcagtgtcttggtatgcagcc
aacatcacacagcagttctttgaccagttttatccagggactaagtatgaaatcggagag
ggcttgtatatcggttggtcttcagctacactttccatctgtggtggttcatgcctgctg
tgtgcttgcagaatcattacacccaatgataaaataccgtatccataccagccttcctcc
agaggacatgtgctgtcaactgtggcaatgtctcagtctgtcccaagcaactatgataga
aatgcatatgtctga
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