Scomber scombrus (Atlantic mackerel): 133994275
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Entry
133994275 CDS
T10651
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133994275
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NCBI-GeneID:
133994275
NCBI-ProteinID:
XP_062289494
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Position
14:1732734..1756964
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AA seq
874 aa
AA seq
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MKGGGRGKEPSVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKQPVLCDQ
DQGSQVQCGSTTEEAEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKSPSCQPVGNPRKKVWSFS
SNSSKDSTTAKKVPKSDSMPQLNFAMADPTKMGGLSMLLLAGEHALTNREIPSSTKPSLP
DTASEGNSFPDDKVEILSGTTLNRVPDITESRVTSALSPLAESSVSAAPEGKPCRQSALF
QLAEMCLASEAGKMDTVVSQPEDSSSSASLQQTTVKPEIKEEKEKTETDDCPPSSHTAAL
LPSLSSVTSTSTDAIPPQLSSQNARVKKKSKKKEASKSNDNEETPCSAKKIIKKCDPAES
NMDSVFSTIEAVAKGVWKDTEEKPKKKIQSSPAVACGNSGLPKKKSKPKVKTCVKEKEEA
MDESSEQCGQHSSSEVEMKEEMTDVSPKTEIEETSIESTELQGSMAEPQNSPPGSPSPTK
LREEDKGKDRSSEAECSTESRGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALR
ASDHDANWSDDSWTVAQMGPNNPKKLKKSKSKDESSQGLGKLEEEFEKKFNSLPQYSPMT
FDKKGTAVSKKKKTDSPSVQEDASKTCKGPSPSQKKTSFHKIVRKHKHKKEKPGAVEKAV
GQSDSTMPDSASKAKSCAPIAIMCPDVQGTTSMEMLVGSQKRKARKTKITHLVRTADGSV
SPAEEDKMRDLNQEQEKKPLPQQNLCNEKGCYSNPTAEEAERSSVPQELPAFFSLAALAE
VAAMENAHRGQRGLAESQKKELAQTQVLISCADQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggaaccgtctgttgcaggggaggtcactggcaagcgc
cccaaacgcaaatgcctgcagtggcacccactcctctccaaaaaggctctggatttctct
gaggaggaagaggaagaggatgaagaggagctggagaagcagccggtgctgtgtgatcag
gaccaggggtcacaggtgcagtgtggaagcacaacagaggaagcggaggaggactcgaac
gaacagcgggctagacggccgatgaacgccttcctccttttctgcaaacgccaccgttcc
ctggtgaggcaggagcaccctcgtctggacaaccgcggggccactaagatcctggctgac
tggtgggcagtgctggagcccaaggagaagcagaaatacactgacatggctaaagagtac
aaggatgcctttatgaaggctaatccaggctacaagtggtgtcccaccaccagcaaacca
gtgaagagcccttcatgtcagccagtcggcaacccccgcaaaaaagtatggtccttctct
tccaactcatccaaggactcgaccactgccaaaaaagtgcccaaaagtgacagcatgcct
cagttaaactttgccatggcagatcctacaaagatgggaggccttagcatgctgctgtta
gccggggaacacgccctcacaaacagagagatcccttccagcactaaacctagtttacca
gacacagccagtgaagggaactcctttccagatgataaagtagagattttgtctgggaca
acactgaacagagtgcctgacatcactgaaagcagggtcacatctgccctttccccactg
gcagagtcgtctgtatctgcggcacctgaaggaaaaccatgcagacagtccgctctcttc
cagctggctgagatgtgtttagcatctgaagctggaaagatggacacagtggtgtctcag
ccagaggacagctcttcttcagcctctctccagcaaactacagtcaagcctgagatcaag
gaggagaaagagaaaacagaaacggacgactgtcctccctcctctcacactgcagccctc
ttaccttcgctctcctctgtcacttctacctccactgatgccattcccccacaactcagc
agccaaaatgcacgtgtcaaaaagaagagcaagaaaaaagaggcgagcaagtcaaatgac
aacgaagaaaccccttgttcagcaaagaagatcatcaagaagtgtgaccccgccgaatca
aacatggacagtgtcttcagtacgattgaggctgtggcaaagggtgtctggaaggacacg
gaggagaagcccaagaagaagatccagagcagtcctgctgttgcctgtggaaactctggt
ttgcccaaaaagaagagcaaacccaaagtcaagacctgtgtcaaagaaaaagaggaggcg
atggatgagagcagcgagcagtgtgggcagcacagctcctctgaggtggagatgaaggaa
gagatgactgacgttagccccaagacagaaatagaagaaacaagtatagaaagcacagaa
cttcagggcagcatggcagaaccccaaaactccccccccggcagcccttcacccactaag
ctcagagaggaggacaaggggaaggaccggtcgagcgaagcggagtgcagcacagagagc
cgtggctccaggaagtcagagaggagctgcaaaggcgccttgtacaagaccctggtttct
gaagggatgctgacatcactgagagccaatattgacagaggtaaaagaggtgctctccgt
gcctctgatcacgatgcaaactggagtgatgacagctggacggtggctcagatgggacct
aataaccccaagaagctgaaaaagtccaagtccaaagatgaatcttcacagggcctaggg
aaactggaggaagagtttgaaaagaagtttaacagcctaccacagtatagcccaatgaca
tttgataagaaggggactgctgtctcaaagaagaagaagacggacagcccctctgttcaa
gaggacgcctccaaaacctgcaaagggccatctccatctcagaaaaagacttcattccac
aagattgttaggaagcacaaacacaaaaaggagaaaccaggtgcagtggaaaaagcagtg
ggacagagtgattccaccatgccggactcagcttcaaaagccaaatcatgtgcccccatt
gccataatgtgcccagatgtacagggcaccactagtatggagatgctagttggtagccag
aagaggaaggctaggaagaccaagatcacacacttggtgcgcacagctgatggcagcgtg
tctccagccgaagaggacaaaatgagggacctcaaccaggaacaggagaagaagccatta
ccccaacagaatttatgcaatgaaaaagggtgctacagtaatcccacagcagaggaggca
gagaggagcagcgtaccacaggagctacctgctttcttcagcctggcagccctcgctgag
gtggcagccatggagaatgctcacagagggcagagaggcctggctgagagtcagaagaaa
gagctcgcccagactcaagtcctcatctcctgcgctgatcagtga
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