Scomber scombrus (Atlantic mackerel): 133994284
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Entry
133994284 CDS
T10651
Name
(RefSeq) LIM domain kinase 1-like
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133994284
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
133994284
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133994284
Protein kinases [BR:
ssco01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
133994284
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
RIO1
Kdo
ABC1
PDZ_6
Motif
Other DBs
NCBI-GeneID:
133994284
NCBI-ProteinID:
XP_062289517
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Position
14:complement(25702478..25712692)
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AA seq
792 aa
AA seq
DB search
MSRRDQRFRRGMKGRCCECSCTLTHWYYEKEEQFYCKKHYWARYGEQCHGCKETITNGLI
MVAGEQRYHPECFSCMQCKRLIGDGDTYMLIERSKLYCGSCFPKGLVSAVRSTTRLTKTP
HMVALVSFPPLEGSQRGLTVTTDLSQEKGSLVTVTELDSAVLSPDLLSYMHIGDHVLEVN
GIPVRNISPDEINCVIMDTNRPLHLTIEHIPLSSDNHPHSASVQDDISCPDPCVRDKLTS
THKLPSLEEEPSPGEETDEPIRMSISPSRNQGAMGMRSRIILRSCSIDKCPLSPRALSVL
SQKRDMIRSESLRVDPGERTHRIFRPSDLIHGEVLGRGCFGQAVKVTHQETGEVMVMKEL
ISFDEETQQTFLKEVKVMRCLDHPNVLKFIGLFYKDKRINFVSEYIQGGTLRETIVKMDK
DVPWSIRVSYAKDIASGMAYLHSMNVIHRDLNSYNCLVKENQSVVVADFGLARLVVEERN
KSKTTSLERPAKGTLSELRRPDRRKRYTVVGNPYWMAPEMIHGKSYDERVDVFSFGIMIC
EIIGQVSADPDYLPRTNDFGLNVPEFLQQYHPPQCPQAFLPLAVRCCDMDSEKRPSFSKL
EEWLENLLMHLDIGLHMLSELEQLHRDFWQNHNHQNHSHNQDETLKSHEQTHSSKLPRQS
PDTTQSSDNGNNHKEPNQLTQSEDQNSTPSSHYDGEQHMHNHHDTRTENGNSCLSKDCKD
HSQEESQRCCRSTSRDLGKERSETYEHNLSGQPNVQHEPSQPLQVNNSLLDLCNTPRKTV
MWDNSTEDSSFL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacgggaccagaggtttcggagaggaatgaaaggacggtgttgtgaatgtagc
tgcacccttactcactggtactatgaaaaagaggaacagttctactgtaagaagcactac
tgggctcggtatggagagcagtgccacggctgcaaggagaccatcacaaatggactcata
atggttgctggagagcaaaggtaccaccctgaatgcttcagttgtatgcagtgtaaaagg
ctcattggagatggagacacctacatgctcatcgaacgctccaaactgtattgtggttcc
tgtttccctaagggtctggtatcagctgtgaggtcgactactcggctcactaaaacaccc
cacatggtggcgctggtgtctttccctcctctagaaggcagccaacgaggcctgactgta
accactgaccttagccaagagaaaggctctctcgtcactgtgacagagttagactcagcg
gtcctcagccctgacctgctgtcctatatgcatattggggaccacgtactggaggtcaac
ggcatcccagtccgcaacatttccccagacgagataaactgtgtgatcatggacacaaac
agaccactgcacctgacaattgaacacatcccactttcttctgacaaccatcctcactct
gccagtgtccaggatgacatcagctgtcctgacccttgcgtccgcgacaaacttacttca
acacacaaactgccaagtctggaggaagaaccaagtccaggagaggagacagatgaacca
atcaggatgagtatctcaccatctcgtaaccaaggagccatgggaatgcgatccagaatc
atcctgcgcagttgtagtatagataagtgtcccttatccccccgagcactgtcagtttta
tctcagaagagagacatgattcgctcagagtctctacgtgtggaccctggagaacggacc
catcgcatcttcagaccctcagaccttatccatggagaagtgcttggcaggggctgcttt
ggacaggctgtaaaggtaacacatcaggagactggggaggtgatggtgatgaaggagttg
ataagttttgatgaagagacacagcagactttcttaaaggaggtaaaggtgatgcgctgt
ctggatcatcccaatgttctcaagttcattgggctattttataaggacaaacgaataaac
ttcgtctctgaatacatccaggggggaactctccgagagaccatcgtgaaaatggacaag
gatgtcccctggagcataagagtgagttatgccaaagacattgcgtctggaatggcatat
ctgcactccatgaatgttatccaccgagatttaaactcatacaactgcctggtcaaagag
aaccagtctgtggttgtggcagattttgggcttgcccggttggtggtggaggagaggaat
aagagcaaaacaacctctttagaacggccagcaaaggggacactgtcagagctccggagg
cctgaccggaggaagcggtacaccgtcgtaggaaacccctactggatggcccctgagatg
atccatgggaaaagctatgatgaacgggtggacgtcttttcgtttggtatcatgatatgt
gagatcataggtcaagtgagtgccgaccctgactacctcccccggacaaatgactttggt
ctaaatgtacctgagttcctgcagcagtaccaccctccacagtgccctcaggccttcctg
ccactggctgtgcgctgctgtgacatggactctgaaaaacgtccatccttttcaaagctt
gaggagtggctggagaacctgctgatgcaccttgacattggcctgcatatgctctccgag
ttagagcagctccacagggatttctggcagaaccacaaccaccaaaaccactctcacaat
caggacgagacccttaagtcccatgaacaaacccactcttcaaagctacccagacagagc
ccggacaccacacaatcttcagacaatggaaataaccacaaagagcctaatcagcttact
cagagtgaagaccaaaatagcacacctagcagtcattatgacggagagcaacacatgcat
aaccatcatgacacgaggactgagaatggtaactcctgcttgagcaaagactgtaaggac
cactcacaagaagagagccagaggtgctgcaggtctacaagcagagacttgggcaaggaa
aggtctgaaacatatgaacacaacctctcaggacagccaaacgttcaacatgagccctca
caaccactgcaggtcaacaactcactgctagacttgtgtaacacacccagaaagacagta
atgtgggacaactctacagaggacagctcctttctctga
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