Scomber scombrus (Atlantic mackerel): 133994293
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Entry
133994293 CDS
T10651
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133994293 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133994293 (sart1)
04121 Ubiquitin system [BR:
ssco04121
]
133994293 (sart1)
Spliceosome [BR:
ssco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
133994293 (sart1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133994293 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
133994293
NCBI-ProteinID:
XP_062289528
LinkDB
All DBs
Position
2:complement(25463078..25465939)
Genome browser
AA seq
776 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEERRREHKKHRHKDRERDREASDRDGTRGKEKRKRSGSRERSGR
DSRSKGERSGGEPRVKKEKVDLAYEEGNNTEVEPQSASGDASLSIEETNKLRAKLGLKPL
ELNQTKKELGTKEDPVVAETINPVLIKKQKDMKEKLAALKEKRIQNQKLGKVKSLADDDW
LDDTAAWVEKSRKLAKEKELAEKRAKLLQEMDEEFGVSSLVEEEFGQSKREAYTSGDLKG
LKVQHKVESFNEGQTVILTLEDKGVLAEEEDVLINVGLVDKEKAEKNVELKKKKPEYKPY
EEEESVDDMVTFKSHSVLSKYDEEIDGEKKKSFRLNTGGFADGERERELQAIKEALRNQA
QSLEMPSLTIASEYYTPQEMVGFKKTKRRVKKIRKKEKQTNAADELLDDTRCTDFGSRSR
GRGRKQVEDDSEEVKEEESEVPNVVPQMSDDIRMAEMDISDEEDFTPPEPAAIEEDEAEQ
ELQKQLEKQRKLKQKQLLKDSGEKVAEQIKVLSKDDHDNDPEKKNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEQEEEKDDAGNSDSDMDENVGWSMVNLDEEVKQPDFSTAS
ATILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVRAPKGALPNDNYCIEDKMGFDDK
YSRREEYRGFTQDFKEKDMYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTE
RRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtccaagaagcataaggaaaagagccgcgacaaggacaccgaggagcgccgc
cgtgaacacaagaaacaccgccacaaggaccgagagagagacagagaggcttcagaccgg
gatgggactcggggtaaagagaaacgaaaacgctccgggtccagggaaagaagtggacga
gatagccgcagcaaaggcgaaaggagcggcggggagccacgggtgaagaaggagaaagtt
gatcttgcatatgaggaaggtaataatacagaagtggagccccagtctgcaagcggagat
gcatcgctcagcattgaggagaccaacaaactcagagccaagctgggactgaagcccctg
gaattaaatcagaccaaaaaggagcttggcacaaaagaggacccagtggtggctgagact
atcaacccagttcttatcaagaagcagaaagatatgaaggagaagctggcagctttgaaa
gagaaacgcatccaaaaccagaaattgggaaaagtcaagtccctagcagatgacgactgg
ctggatgacaccgctgcttgggtggaaaaaagccggaagttggctaaagaaaaagaattg
gcagaaaaacgagccaaacttctgcaagagatggatgaggagttcggtgtcagcagtctg
gtcgaggaggaattcggacaaagcaagagggaagcctatacatctggagatctgaaagga
ctcaaagtgcagcacaaggtggaatccttcaatgagggccaaactgtcatcctgacactg
gaagacaaaggagtgctcgcagaggaggaagacgttctcataaatgtgggactggttgac
aaggagaaggccgaaaaaaatgtggagttaaaaaagaaaaagccagaatacaagccctat
gaagaagaggagagtgtggacgacatggttacgtttaagtcccactctgtgctgtcaaag
tatgatgaggagattgatggcgaaaagaaaaagagtttccgactgaatacagggggcttt
gctgatggagagcgcgagcgggagctccaggccataaaagaggctctacgaaatcaggcc
cagtccttggaaatgccctctctcactatcgcgtctgagtactacacaccccaggaaatg
gtcggctttaaaaaaacaaaacgccgtgtgaagaagatcagaaagaaggagaagcagaca
aatgcagctgatgaactcctcgatgacactcggtgtactgatttcggctccaggtcacgt
ggcagaggccgcaaacaggtggaagacgacagcgaagaagttaaggaagaggaaagcgaa
gtgccaaatgttgtcccccaaatgtctgatgacatcaggatggcagaaatggacataagc
gatgaagaagacttcacaccccctgagcctgctgcgattgaggaggacgaggcggagcag
gagctgcagaaacaactggagaagcagaggaagctaaagcaaaagcagcttctcaaagac
tctggggagaaggtggcagagcagattaaagttcttagtaaagacgaccatgacaatgat
cctgagaagaagaacaacattgttttcaacgcgacctctgagttttgcagaactctgggt
gacattccaacgtacggcctgtcaggcaacagagaggaccaagaggacattatggatttt
gaacaggaggaagagaaagatgatgctggaaattcagactcggatatggatgagaatgtt
ggatggagcatggttaacttggatgaagaggtgaaacaaccagatttctccacagcctct
gccaccattttggatgaagagccaattgtcaactctgggcttgctgctgcattgctgttg
tgcaaaaacaaaggtcttttggacactcaaatgcaaaaggttgcccgtgtcagagcacca
aagggcgccctgcccaatgacaactactgcatcgaggacaagatgggctttgatgacaag
tacagccgcagagaagaatacagaggcttcacccaagatttcaaggagaaggatatgtat
aaacctgacgtcaaaattgagtacgtggatgagtctgggcggaaactgaccccaaaagaa
gctttcaggcagctttcacatcgcttccatggaaaaggctctggaaagatgaaaacagag
aggaggatgaaaaagcttgaggaggaggcgctgctgaagaagatgagcagcagcgatact
cctctagggacggtggctttgcttcaagagaaacagaaatcccagaaaacaccatacatt
gtgcttagtgggagtgggaaaagtatgaatgccaacaccattactaaataa
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