Scomber scombrus (Atlantic mackerel): 133994309
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Entry
133994309 CDS
T10651
Name
(RefSeq) homeobox protein MSH-D-like
KO
K09341
homeobox protein MSX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133994309
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133994309
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GFIT
Motif
Pfam:
Homeodomain
LodA_C
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
133994309
NCBI-ProteinID:
XP_062289539
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All DBs
Position
14:complement(24505501..24506877)
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AA seq
280 aa
AA seq
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MTTQETYKDLGCSSSEEDSNRADLADTSAEEKTSPVVRRHHPFSVEALMSGRKTDGRGGE
STCGTPESGAVVLSPSGLNSLYMCRETCSPPGGSRKRFMASPSSPVKSETSESEDCAPWV
TNSAFSAQPRLINPNCQLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSS
LTLTETQVKIWFQNRRAKAKRLQEAELEKLKMAADAKTAAVAAAAAGALHPGFTLPLSLG
AMSLYGQSYSAYHQQHRPILPISPLGLYAAPLGYGMYHLS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgactactcaggagacctataaggacttggggtgcagttcgtcggaagaggacagtaac
cgcgcggacttggcagacacttcagcagaggagaagacatctccggtggtgcgccggcat
cacccgttcagtgtggaggcgcttatgtccgggaggaagacggacggacgtggcggagag
tccacctgcggtacaccggagagtggagcggtggtgttgtctccctcaggattaaactct
ctgtatatgtgccgggagacgtgcagtcctcctgggggaagccgaaaaaggtttatggct
tccccttcgtcgcctgtaaaatccgaaacatcagagtccgaggactgcgcgccatgggtc
accaacagcgcgttttctgcacaaccacgtctcatcaatcccaactgtcagttgaggaag
cacaagaccaaccgaaagccccgcactcccttcaccacgtctcagctcctggccctggag
aggaagttcagacagaagcagtatctgtcaattgcagagcgggctgagttctcctcgtcc
ttgaccctgacagagacccaggtgaagatctggttccaaaatcgccgggcaaaagccaag
aggctccaggaggccgagctggagaaactcaagatggctgctgacgccaagacggcagca
gtggcagccgctgctgctggagctttacaccctggctttacgttaccactgtcattgggc
gccatgtcattatacggacagtcatactctgcctaccatcagcagcacagacccatactg
cccatttcacctttaggactgtacgctgctcctctgggctacggcatgtaccacttgtca
taa
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