Scomber scombrus (Atlantic mackerel): 133994334
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Entry
133994334 CDS
T10651
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133994334 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133994334 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133994334 (sptbn4a)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133994334 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
133994334 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
133994334
NCBI-ProteinID:
XP_062289568
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All DBs
Position
14:complement(4069681..4091704)
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AA seq
1528 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIHEKPELRPVVQQK
LEEIRECWSDLETTTKAKARQLFENNKPEPSVKSYSDLDNQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGEKESGEQSAVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPVASCKDYGNNLQNVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLEAERRSVMLDATL
QSQQYYTEAAKVESWLSGQKLHLVNEERGTDESSTLQLLKAHLALEQTVETYAETVGMLS
QQCGRLMELGHPDSEQLTKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELER
WITERESVASSTDLGHDLEDVTVLQEKFTKFASETNNVGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVM
EAWKELLSSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEVMMR
QHQELKAKIDGRSKTIQQCADLGKILIAAGNPASEEIKEKLDSLLAKQRDLVEKWDKHQE
KLLRKQEKFQFAQETVKAEAWLKAKEPLITSREPEGGEAQAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKTPLSSRRMFPLSCLTPVPSTSATSSFLRQTVQAHM
ESKPLQTSLDLGATPATQRLSSSLASYHPIINGSGYHGLEQQCSAKLVGSSYLGMNHQVT
GGGSDSGFSALTSHSGGGDTSTYLGKNHQTVGSAESSGYYGMTTGCVGGSGHSMQNHLAS
GIVGSSGNLAQQQCSGGMGSPSFHPHQNMGSSGYLAQPQNVVSSGYLGHPPNLGSSGYLA
QQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQNYQGSGGMGSSSYLAQNHYSSGS
LGSSGYLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAVNPLLEASRVQREQFGDIPM
ADMVGPESGLDLLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPL
IVRQERYRRRLERQSSSEQEGSGKQRLQRQDSSDLEGSVKEGSDKRSGEKRNTMAEIVEQ
VQEREAATARGEPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPAT
GAPPTPQPPSHTAQNEGFLYRKKATTTDLEAQQRSPNSKSWTNVYCVLKDGMLTFYKDAK
NHTATYNGEPPVDLINSSFDPSLGYKKKKNVFIVNMNDGNNFVFHAKDEEDLKAWTSNIT
TCIAEHEAMGIWDKPGTSTLDPECSERKEKSEGDADARSERSEVVEGEERSEKERSEKGD
GSDKLDTSEIADKMEGGAGGSSTSGKSK
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggcccgagacacggcgcgggatgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcagaactggcccgcaataaggaatggctcgccaagatagaa
caggagggtcaggagctgatccacgagaagccggagctgcgtccggtcgtgcagcagaag
ctggaggagatcagagagtgctggtccgacctggagaccaccaccaaggcgaaggcccgc
cagctctttgagaacaacaagcccgagccttcggtgaagagctactcggacctggacaac
cagctctcgcacttggagcagcagcccccccagctggaacaggctcaccatctgcccacc
ttcaatgagcagcttcagaaattccaggctatggagtctcagataggggacttttacaag
gatgtgggagaactgggaagcttgcagggggtctgcctaccccagcgagggctgatggca
ggtgagaaggaaagtggagagcagtcagccgtggttgagacccgcatcgtccgcctcatt
gagcccctgaaggagagacgccgcatcctgctggcctccaaagagatgcaccaagtcgcc
caggacctggaggatgagatactgtggattcaggagcgtcttcctgtggcctcctgtaaa
gattatggaaataacctccagaatgtccagcagcatgtaaaaaagaaccagactctccag
agggagctgacggggcggcgggcacgtgttgaagaggttctagaccgggcggggattatc
gcttcgctgcgcactccagaggtggagttcgtgcgtgaaggggcggggcacgtgcgccag
ctgtgggaggtgctgcagctggaggcagaaaggaggtccgtgatgctggacgccacgctg
cagtctcagcagtactacacggaggcggctaaagtggagtcctggctgtcaggtcagaag
ctccatctggtcaatgaagaaagaggcacggatgagtcaagcaccctgcagctgctgaag
gcccacctggccttagagcaaactgtggaaacatatgctgagacagtaggcatgctctcc
cagcaatgtgggcgcctaatggaactgggacacccagacagtgagcagctcaccaagcag
cagtcccacatagaccggctgtatgtgtccctgaaggacatggtggagcacaggaagacc
aagctggagcagcagtactggctctatcagctcaacaaagaggtggaggagctagagagg
tggatcactgagcgcgagtcggtggccagttccactgacttgggccacgaccttgaggat
gtcacggtgcttcaggagaagttcaccaagtttgcctcagaaaccaacaacgtcggccag
cagcggatggagcaggtgaacaaaatggtgaacgagatgatcgactgcggccactcggac
gccgccaccatcgcggagtggaaggacggactgaacgagtcctgggccgacctcctggag
ctgatggagacccgcaggcagatgctggcagcgtcccaccagctgcacaagttcttcacc
gactgtaaagaggtcttggctcagatcgcggggaagatgaagcagctgccagaggtgagg
gcgtgccaagccaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctagttgcacaggtaaggcagctgcaggagaacgctgcccagctt
aggaccatctacgctggtgagaaagctgaggccatcatggtgaaagagcaggaggtgatg
gaggcgtggaaggagctgctcagctcttgtgaggccagtcgcgtccaggtcacttcagta
accgacaaggtgcagttcttctccgtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagattggatgggatgagcccagagatttgacagctcttgaggtgatgatgagg
cagcatcaggagctgaaagccaaaatagacggccgcagcaagaccattcagcagtgcgca
gatctcggcaagatcctgatcgctgcgggcaaccctgcgtcagaggagataaaagagaag
ttggacagccttctggctaagcagagggatcttgttgagaaatgggacaaacaccaggag
aagttactgcgcaagcaggaaaagttccagttcgcccaggagaccgtaaaggcggaagcc
tggctgaaggccaaggagccgctgatcacctccagggagccggaaggaggagaggcccag
gcccaaactgatgaggttgagcagctcatccttcgccacgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctcactccgccagctttccgcagctgagaagaaaaaa
gaggaggagaaaaagaccccgctctccagccgaaggatgttcccgttatcttgtctgact
cccgttccctcaaccagtgctacctcatctttcttgaggcagacggtacaagctcatatg
gaatccaaacccttacagaccagtctggatctgggtgccaccccagcaacccagagattg
tcctcatcgcttgccagctaccacccaatcataaatggatcaggctaccacggactggaa
caacagtgcagtgcaaagttggtgggctcctcctaccttgggatgaatcatcaggtgacc
ggaggtggaagtgactccgggttttcagcactgacctcccacagtggtggaggagacact
tctacctaccttgggaaaaaccatcaaactgttggcagtgcagagagctccgggtactat
ggaatgactactgggtgtgtgggtggctctggccactcaatgcaaaaccatctagccagt
ggcattgtaggaagttcaggtaacctagctcagcagcaatgtagtggaggtatgggaagc
ccaagtttccaccctcatcagaatatgggaagttctgggtatttagcgcaaccacaaaat
gtggtaagttctggatacttgggacacccgcctaatttggggagttcaggatatttggca
caacagcctaatatggggagtactgggtatttggcccaacagcctaatatggggagtact
gggtatttggcacaacagcctaatatggggagtactggctacctagcgcagaattatcag
ggcagtggaggaatgggtagctcaagctatctggcacaaaatcattacagtagtggaagt
ctgggcagttctggttacttggcgcagagtggtggcatcatggacccgaaaatggcatat
gcatggcagcacctgaaagctgacttcatgcagcccaggatcaaccacatccacaaggct
gtaaatcccctactagaagctagcagagtgcaacgagaacagtttggggacatcccaatg
gcagacatggtggggccagagtcagggctggacctcctccacggccgtctccagagggat
ccacgtggcagccgctctgacccccagatggaccatctgaggcgagagagggagtacaag
ctgggtagacagacctccagcgaacaggagatccaagccaggctgaacgagctgccgctg
attgtgcgtcaggagcgctacaggagacgcctggagaggcagtcgtccagtgaacaagag
gggagtggcaagcagaggctgcagagacaagactccagtgacctggagggctctgttaaa
gagggctctgacaaacgctcaggggagaagagaaataccatggcggagattgtagaacag
gtccaggagagagaggcggcaactgcacgaggagagccttaccggcctcctagcagcctc
tcagcacctgtaactcgttttgacggacgtccccgcgccagagaccgccccaaaccaagg
aggaggccccgtccaaaagagcctgaagagacacggcgttctcgctccgccccagctacc
ggtgccccgccaacaccccagccaccttcacacactgcccaaaacgaaggctttctgtac
cgcaaaaaggccaccactactgaccttgaagctcaacagaggagccccaacagtaagtcc
tggacgaacgtatactgtgtgctgaaagatggaatgctgaccttctataaggatgctaag
aaccacaccgcgacctacaacggagagcctcccgttgaccttattaactcctcatttgat
ccctcgctgggatacaagaagaagaaaaatgtgttcattgttaacatgaatgacggaaac
aactttgtgttccatgcaaaagatgaggaggatcttaaggcctggacttcgaacataacc
acctgtatagctgagcatgaggccatgggcatatgggacaagccaggcacctcaaccttg
gaccccgaatgctcggagaggaaggagaagtcggaaggggacgccgacgccaggtcagag
agatcggaggtcgtcgaaggggaggagaggtctgagaaggagaggtcagagaaaggggac
ggctctgataagctagacacgtcagaaatcgctgacaagatggagggcggggcggggggc
tccagcacgtctggaaagagcaaatga
DBGET
integrated database retrieval system
